PDBsum entry 4zch

Tunnel analysis for: 4zch calculated with

MOLE 2.0

PDB id

4zch

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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without HETATM:

8 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.28

1.53

30.5

-2.05

-0.65

10.0

80

3

1

7

0

1

3

1

2

1.21

1.43

31.5

-0.10

0.06

9.2

77

2

1

3

3

3

2

1

3

1.25

1.50

32.7

-0.51

-0.22

13.3

77

1

4

5

4

3

1

1

4

1.36

1.58

33.6

-1.98

-0.54

10.6

76

3

1

8

0

2

3

3

5

1.25

1.51

38.3

-0.69

-0.11

13.4

76

5

2

5

3

3

1

1

6

1.24

1.50

44.4

-0.23

-0.23

7.2

76

3

3

6

4

3

1

1

7

1.49

1.52

31.6

-2.02

-0.57

10.1

76

1

2

8

0

3

4

1

8

1.21

1.28

17.6

-0.78

-0.16

9.6

72

2

1

2

3

3

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.