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PDBsum entry 4zak

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Immune system PDB id
4zak
Contents
Protein chains
267 a.a.
98 a.a.
203 a.a.
239 a.a.
Ligands
NAG-NAG
NAG ×2
4LX

References listed in PDB file
Key reference
Title A novel glycolipid antigen for nkt cells that preferentially induces ifn-γ Production.
Authors A.M.Birkholz, E.Girardi, G.Wingender, A.Khurana, J.Wang, M.Zhao, S.Zahner, P.A.Illarionov, X.Wen, M.Li, W.Yuan, S.A.Porcelli, G.S.Besra, D.M.Zajonc, M.Kronenberg.
Ref. J Immunol, 2015, 195, 924-933. [DOI no: 10.4049/jimmunol.1500070]
PubMed id 26078271
Abstract
In this article, we characterize a novel Ag for invariant NKT (iNKT) cells capable of producing an especially robust Th1 response. This glycosphingolipid, DB06-1, is similar in chemical structure to the well-studied α-galactosylceramide (αGalCer), with the only change being a single atom: the substitution of a carbonyl oxygen with a sulfur atom. Although DB06-1 is not a more effective Ag in vitro, the small chemical change has a marked impact on the ability of this lipid Ag to stimulate iNKT cells in vivo, with increased IFN-γ production at 24 h compared with αGalCer, increased IL-12, and increased activation of NK cells to produce IFN-γ. These changes are correlated with an enhanced ability of DB06-1 to load in the CD1d molecules expressed by dendritic cells in vivo. Moreover, structural studies suggest a tighter fit into the CD1d binding groove by DB06-1 compared with αGalCer. Surprisingly, when iNKT cells previously exposed to DB06-1 are restimulated weeks later, they have greatly increased IL-10 production. Therefore, our data are consistent with a model whereby augmented and or prolonged presentation of a glycolipid Ag leads to increased activation of NK cells and a Th1-skewed immune response, which may result, in part, from enhanced loading into CD1d. Furthermore, our data suggest that strong antigenic stimulation in vivo may lead to the expansion of IL-10-producing iNKT cells, which could counteract the benefits of increased early IFN-γ production.
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