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PDBsum entry 4z90

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Pore analysis for: 4z90 calculated with MOLE 2.0 PDB id
4z90
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.35 28.9 -0.78 -0.35 11.6 73 2 1 2 2 2 0 0  
2 2.16 2.36 33.7 -1.01 -0.05 10.2 80 3 1 4 4 3 1 0  
3 1.71 1.71 62.7 2.24 0.74 1.1 73 0 0 1 16 5 0 0  MES 401 H
4 1.88 2.55 63.3 2.02 0.85 2.1 76 1 0 1 15 3 0 1  MES 403 F
5 1.90 2.44 69.1 2.03 0.66 3.3 73 2 0 1 17 4 0 1  
6 1.66 1.84 71.6 -1.19 -0.19 18.3 82 5 5 7 5 4 0 0  
7 1.80 2.03 78.1 -0.94 -0.25 10.4 84 6 2 10 6 3 2 0  
8 1.97 2.88 79.2 -1.04 0.07 10.3 80 6 2 10 7 7 2 0  
9 1.54 1.80 95.9 -1.74 -0.16 19.7 78 8 5 7 6 5 1 0  
10 1.29 1.50 105.9 -1.40 -0.13 19.9 77 6 8 6 11 6 2 0  
11 1.26 1.35 119.3 -0.16 0.12 11.3 81 5 6 7 17 6 2 0  MES 401 B
12 1.90 2.10 114.1 1.92 0.77 2.7 73 1 1 2 25 6 0 1  MES 403 A
13 1.84 2.22 115.9 -0.55 0.01 14.0 84 3 6 8 11 6 0 0  MES 401 G
14 1.33 1.39 129.7 -1.04 -0.16 16.3 84 9 11 13 12 6 1 0  
15 2.00 2.21 141.7 -1.56 -0.23 14.6 80 8 5 15 7 5 5 0  
16 1.36 1.63 147.1 -0.75 -0.04 12.4 77 7 8 14 16 12 4 0  
17 1.78 1.78 155.5 -0.67 0.12 11.4 79 9 7 11 12 10 2 0  MES 401 I
18 1.31 1.50 158.7 -0.58 0.12 12.6 80 5 9 11 19 10 3 0  MES 401 B
19 1.22 1.29 182.0 -0.26 0.13 11.0 78 6 8 10 22 11 3 0  MES 401 D
20 1.73 1.76 183.2 -1.47 -0.34 19.7 82 14 15 17 10 8 2 0  
21 1.79 2.09 188.6 0.09 0.30 8.7 77 9 7 11 19 11 2 0  MES 401 I
22 1.25 1.68 190.1 -1.13 -0.25 16.9 81 9 16 14 17 9 3 0  
23 1.26 1.54 195.3 -0.71 0.03 15.5 81 9 10 9 19 9 2 0  MES 401 B MES 401 I
24 1.27 1.42 198.1 -0.61 -0.03 19.2 82 9 13 8 19 5 0 0  MES 401 I
25 1.32 1.16 203.1 -0.70 -0.07 14.6 81 12 8 12 18 8 3 1  
26 1.23 1.24 212.3 -0.36 0.16 11.1 77 5 4 7 27 10 4 0  MES 401 B MES 401 D
27 1.78 5.20 224.8 0.55 0.41 12.0 74 7 7 4 27 8 0 1  MES 402 A MES 401 I
28 1.25 1.62 238.3 -0.13 0.20 13.0 78 8 10 7 28 10 2 0  MES 401 B MES 401 I
29 1.42 1.60 241.4 -1.90 -0.48 23.2 84 20 21 17 10 5 2 0  
30 1.65 5.30 255.0 -0.87 -0.14 16.9 82 12 16 14 18 8 1 0  MES 401 I

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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