PDBsum entry 4z89

Rim-binding protein

PDB id: 4z89

Contents

Protein chains

(+ 4 more) 65 a.a.

12 a.a.

11 a.a.

Ligands

GLY-ARG-ARG-LEU-PRO-PRO-THR-PRO-SER-LYS

ACE-ILE-GLY-ARG-ARG-LEU-PRO-PRO-THR-PRO

GLY-ARG-ARG-LEU-PRO-PRO-THR-PRO ×3

Metals

_CA

Waters ×134

PDB id:

4z89

Name:

Rim-binding protein

Title:

Sh3-ii of drosophila rim-binding protein bound to a cacophony derived peptide

Structure:

Rim-binding protein, isoform f. Chain: a, b, c, d, e, f, g, h, i, j. Fragment: unp residues 1318-1382. Engineered: yes. Voltage-dependent calcium channel type a subunit alpha-1. Chain: a, b, c, d, e, f, g, h, i, j. Fragment: unp residues 1688-1702. Synonym: protein cacophony,protein nightblind a,protein no-on- transient b,dmca1a.

Source:

Drosophila melanogaster. Fruit fly. Organism_taxid: 7227. Gene: rbp, dmel_cg43073. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 7227

Resolution:

2.64Å R-factor: 0.258 R-free: 0.312

Authors:

J.H.Driller,N.Holton,M.Siebert,M.A.Boehme,M.C.Wahl,S.J.Sigrist,B.Loll

Key ref:

M.Siebert et al. A high affine rim-Binding protein/aplip1 interaction prevents the formation of ectopic axonal active zones. To be published, . PubMed id: 26274777

Date:

08-Apr-15 Release date: 05-Aug-15

Protein chains

A0A0B4JDC9  (A0A0B4JDC9_DROME) -  RIM-binding protein, isoform F from Drosophila melanogaster

Seq: 1844 a.a.

Struc: 65 a.a.*

Protein chains

P91645  (CAC1A_DROME) -  Voltage-dependent calcium channel type A subunit alpha-1 from Drosophila melanogaster

Seq: 1851 a.a.

Struc: 12 a.a.

Protein chain

P91645  (CAC1A_DROME) -  Voltage-dependent calcium channel type A subunit alpha-1 from Drosophila melanogaster

Seq: 1851 a.a.

Struc: 10 a.a.

* PDB and UniProt seqs differ at 1 residue position (black cross)