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PDBsum entry 4z6c

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 4z6c calculated with MOLE 2.0 PDB id
4z6c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.27 1.35 35.0 -1.25 -0.29 21.6 83 5 4 1 4 1 0 1  MG 401 A 0KX 402 A DA 10 P DG 6 T
2 1.28 1.35 39.4 0.31 0.31 8.9 76 2 1 1 5 2 1 1  0KX 402 A DT 6 P DG 7 P DC 8 P DG 9 P DA 10 P DG
6 T
3 1.27 1.36 43.1 -1.48 -0.42 22.9 85 4 6 2 4 1 0 1  MG 401 A 0KX 402 A DA 10 P DG 6 T
4 1.28 1.36 43.3 0.53 0.34 8.5 80 2 1 1 5 2 0 1  0KX 402 A DA 5 P DT 6 P DG 9 P DA 10 P DC 5 T DG
6 T DT 7 T DC 8 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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