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PDBsum entry 4z1m

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Pore analysis for: 4z1m calculated with MOLE 2.0 PDB id
4z1m
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 1.57 42.5 -1.15 -0.32 19.4 74 3 5 1 4 3 1 0  
2 1.46 1.91 45.4 -1.78 -0.30 26.2 73 6 4 0 2 3 1 0  
3 1.69 1.98 46.7 -2.10 -0.36 29.6 74 5 5 1 2 3 1 0  
4 1.25 2.22 49.5 -0.68 -0.31 13.6 82 4 5 4 11 0 1 0  
5 1.33 3.19 69.4 -0.97 -0.23 15.0 78 5 8 2 10 4 1 0  
6 1.45 1.39 94.2 -1.87 -0.42 24.5 77 10 6 2 6 3 2 0  
7 2.03 2.12 129.8 -1.21 -0.33 22.0 83 8 9 5 9 3 1 0  
8 1.51 1.65 138.6 -1.48 -0.31 19.1 82 14 8 9 11 6 5 0  
9 1.44 1.84 171.4 -1.22 -0.35 20.6 84 17 14 8 18 2 4 0  
10 1.55 1.55 168.6 -1.71 -0.44 22.3 82 15 15 10 13 7 3 0  
11 1.50 1.50 185.5 -1.62 -0.42 22.9 82 17 18 8 14 6 2 0  
12 1.12 1.36 202.4 -1.09 -0.22 16.7 83 17 11 15 18 10 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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