PDBsum entry 4z1d Go to PDB code:  Pore analysis for: 4z1d calculated with MOLE 2.0 PDB id 4z1d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 2.30 26.5 -2.75 -0.40 26.9 85 5 3 4 2 0 1 0  PEP 300 A 2 1.31 1.31 27.4 -1.04 -0.40 9.9 88 2 2 4 2 2 0 0   3 1.48 2.44 29.4 -2.93 -0.51 32.6 85 6 5 6 2 1 1 0  PEP 300 B 4 1.17 1.40 41.6 -2.50 -0.59 26.4 85 6 6 7 2 1 1 0  PEP 300 B 5 1.28 1.49 58.8 -1.71 -0.40 18.5 78 6 5 8 5 6 1 0  PEP 300 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.