PDBsum entry 4yzb Go to PDB code:  Pore analysis for: 4yzb calculated with MOLE 2.0 PDB id 4yzb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.08 1.96 40.4 -2.16 -0.64 19.8 87 7 3 7 2 0 0 0   2 3.56 3.90 42.9 -2.73 -0.59 34.5 84 9 8 3 1 1 1 0   3 1.19 1.19 51.7 -1.96 -0.47 29.3 84 5 3 2 2 1 0 0   4 1.19 1.19 59.9 -1.25 -0.28 16.1 81 2 7 2 4 3 0 0   5 1.35 1.37 62.5 -0.84 -0.19 18.4 82 7 6 4 7 2 0 0  BK8 505 B 6 2.87 3.30 63.9 -2.66 -0.66 27.7 81 11 6 4 0 1 1 0   7 1.22 1.26 78.8 -1.51 -0.36 23.9 82 9 6 3 6 2 0 0   8 1.21 1.26 94.0 -1.46 -0.40 24.6 81 9 7 3 5 2 0 0   9 1.25 1.24 104.1 -1.71 -0.63 21.2 90 8 9 5 6 0 0 0   10 2.47 3.86 126.3 -2.53 -0.65 30.3 80 11 8 4 3 2 0 0   11 1.72 1.88 144.1 -2.66 -0.63 33.1 81 18 12 6 2 2 0 0   12 1.22 3.98 155.1 -1.75 -0.46 25.1 79 13 8 3 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.