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PDBsum entry 4yu0
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Pore analysis for: 4yu0 calculated with  MOLE 2.0
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PDB id
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4yu0
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.45 |
2.63 |
39.7 |
-2.46 |
-0.55 |
28.6 |
85 |
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9 |
3 |
3 |
3 |
0 |
2 |
0 |
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PO4 304 A
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2 |
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1.60 |
1.75 |
52.1 |
-2.02 |
-0.54 |
28.7 |
91 |
7 |
5 |
3 |
5 |
0 |
0 |
0 |
PO4 302 B PO4 304 B
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3 |
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2.09 |
2.23 |
56.0 |
-2.18 |
-0.53 |
28.1 |
91 |
9 |
4 |
6 |
4 |
0 |
1 |
0 |
PO4 304 A PO4 302 B PO4 304 B
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4 |
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2.09 |
2.23 |
56.5 |
-2.09 |
-0.45 |
27.4 |
90 |
9 |
4 |
5 |
5 |
0 |
1 |
0 |
PO4 302 B PO4 304 B
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5 |
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1.57 |
1.72 |
62.9 |
-2.37 |
-0.47 |
32.0 |
83 |
10 |
3 |
3 |
5 |
1 |
1 |
0 |
PO4 304 A
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6 |
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2.10 |
2.23 |
76.6 |
-2.33 |
-0.52 |
29.5 |
89 |
12 |
6 |
6 |
6 |
0 |
2 |
0 |
PO4 304 A PO4 302 B PO4 304 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program