PDBsum entry 4ynp Go to PDB code:  Tunnel analysis for: 4ynp calculated with MOLE 2.0 PDB id 4ynp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.34 29.7 0.63 0.21 8.2 76 4 4 1 9 4 1 0   2 1.34 1.55 29.7 -0.03 0.21 12.0 81 3 3 4 9 3 0 0   3 1.30 2.07 32.2 -0.04 0.06 14.5 78 5 6 2 12 1 1 0   4 1.20 1.41 35.7 0.24 0.08 16.3 71 3 5 1 11 2 2 3   5 1.44 4.25 36.8 -0.12 -0.05 15.8 83 4 3 5 10 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.