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PDBsum entry 4ymd

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protein ligands metals Protein-protein interface(s) links
Sugar binding protein PDB id
4ymd

 

 

 

 

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Contents
Protein chains
(+ 0 more) 154 a.a.
Ligands
MAN-MAN ×4
GOL ×7
Metals
_CA ×18
Waters ×15
PDB id:
4ymd
Name: Sugar binding protein
Title: Cl-k1 trimer bound to man(alpha1-2)man
Structure: Collectin-11. Chain: a, b, d, f, c, e. Synonym: collectin kidney protein 1,cl-k1. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: colec11, unq596/pro1182. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008
Resolution:
2.87Å     R-factor:   0.216     R-free:   0.264
Authors: R.Wallis,U.Venkatraman Girija,A.R.Gingras,P.C.E.Moody,J.E.Marshall
Key ref: U.Venkatraman Girija et al. (2015). Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome. Bmc Biol, 13, 27. PubMed id: 25912189 DOI: 10.1186/s12915-015-0136-2
Date:
06-Mar-15     Release date:   08-Apr-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9BWP8  (COL11_HUMAN) -  Collectin-11 from Homo sapiens
Seq:
Struc:
271 a.a.
154 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
DOI no: 10.1186/s12915-015-0136-2 Bmc Biol 13:27 (2015)
PubMed id: 25912189  
 
 
Molecular basis of sugar recognition by collectin-K1 and the effects of mutations associated with 3MC syndrome.
U.Venkatraman Girija, C.M.Furze, A.R.Gingras, T.Yoshizaki, K.Ohtani, J.E.Marshall, A.K.Wallis, W.J.Schwaeble, M.El-Mezgueldi, D.A.Mitchell, P.C.Moody, N.Wakamiya, R.Wallis.
 
  ABSTRACT  
 
No abstract given.

 

 

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