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PDBsum entry 4ykp
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Tunnel analysis for: 4ykp calculated with  MOLE 2.0
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PDB id
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4ykp
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.21 |
2.30 |
24.0 |
-1.69 |
-0.41 |
24.0 |
73 |
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3 |
4 |
1 |
0 |
2 |
2 |
0 |
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2 |
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1.21 |
2.30 |
29.8 |
-1.68 |
-0.52 |
22.0 |
72 |
4 |
4 |
1 |
0 |
3 |
2 |
0 |
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3 |
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1.16 |
1.16 |
19.1 |
-0.77 |
-0.36 |
8.4 |
83 |
2 |
0 |
1 |
3 |
1 |
0 |
0 |
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4 |
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1.16 |
1.16 |
22.0 |
-1.12 |
-0.46 |
10.7 |
82 |
3 |
0 |
1 |
3 |
1 |
0 |
0 |
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5 |
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1.17 |
1.17 |
22.9 |
-1.41 |
-0.52 |
13.9 |
85 |
2 |
2 |
2 |
3 |
1 |
0 |
0 |
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6 |
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1.10 |
2.50 |
17.5 |
0.60 |
-0.02 |
8.2 |
77 |
1 |
2 |
1 |
5 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program