PDBsum entry 4ykn Go to PDB code:  Pore analysis for: 4ykn calculated with MOLE 2.0 PDB id 4ykn Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.20 26.9 -1.84 -0.57 27.7 81 5 5 0 10 0 1 1   2 1.49 2.63 27.3 -2.12 -0.41 19.4 87 1 4 4 3 1 1 0   3 1.93 4.02 39.3 -1.38 -0.12 15.6 78 7 3 6 8 3 2 0   4 1.80 3.31 46.8 -2.99 -0.75 30.0 86 8 10 6 1 0 1 0   5 1.28 1.72 47.4 -1.22 -0.50 13.9 81 4 7 7 5 2 6 0   6 1.80 3.31 48.9 -2.40 -0.51 25.4 82 11 8 4 2 0 1 0   7 1.48 1.52 54.5 -1.81 -0.53 23.8 79 5 10 5 2 4 6 2   8 1.52 1.66 55.9 -0.17 -0.17 12.4 83 3 7 2 14 1 2 0   9 1.48 1.53 56.7 -1.37 -0.33 20.2 77 8 8 4 3 4 7 2   10 1.98 2.14 57.7 -2.29 -0.55 23.1 80 8 7 4 5 0 5 1   11 2.19 2.29 57.8 -1.45 -0.46 15.3 84 4 3 4 6 0 5 0   12 1.48 1.51 59.5 -1.48 -0.29 15.8 76 5 5 6 4 5 7 2   13 1.48 1.52 61.7 -1.66 -0.40 11.4 80 7 3 6 6 6 11 1   14 1.96 2.17 67.1 -2.17 -0.40 20.7 84 11 6 6 7 1 3 1   15 2.05 2.05 67.1 -1.43 -0.29 14.4 88 7 3 6 8 1 3 0   16 1.48 1.58 67.7 -2.43 -0.40 25.5 82 12 12 6 2 3 5 1   17 1.29 1.67 70.1 -0.77 -0.39 12.4 81 4 9 7 14 4 5 0   18 2.07 2.05 74.3 -2.36 -0.42 23.6 85 13 7 6 5 2 3 1   19 1.49 1.60 75.7 -1.60 -0.34 13.7 83 8 4 11 7 4 7 0   20 2.79 3.28 75.9 -2.42 -0.55 30.1 82 10 13 5 3 1 6 1   21 1.50 1.62 84.4 -1.80 -0.33 19.5 86 11 7 10 7 3 5 1  4EL 2101 A 22 2.19 2.35 86.1 -2.15 -0.47 25.8 83 10 11 4 5 1 5 0   23 1.94 2.13 86.8 -2.60 -0.52 29.1 82 15 14 6 5 1 5 1   24 2.39 3.68 89.8 -1.78 -0.51 23.7 88 8 8 9 8 0 5 1  4EL 2101 A 25 1.50 1.54 93.0 -1.34 -0.36 12.8 82 8 4 7 10 4 14 1   26 2.01 2.19 94.0 -2.75 -0.55 31.0 83 17 15 6 3 2 5 1   27 1.97 2.26 100.5 -1.58 -0.45 20.7 90 8 6 8 10 0 4 0  4EL 2101 A 28 2.39 3.07 107.4 -2.47 -0.52 29.5 85 17 12 12 5 1 2 1  4EL 2101 A 29 1.48 1.54 127.7 -1.75 -0.38 18.2 81 13 8 13 8 5 12 3  4EL 2101 A 30 1.57 1.82 127.9 -2.36 -0.61 28.9 85 17 14 11 8 1 3 0  4EL 2101 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.