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PDBsum entry 4yk0

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Pore analysis for: 4yk0 calculated with MOLE 2.0 PDB id
4yk0
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 1.79 34.2 0.09 0.24 17.4 79 5 4 2 11 1 5 0  986 1201 A 986 1201 D
2 1.71 1.80 37.4 0.00 0.19 13.6 73 4 4 2 10 2 7 0  986 1201 A
3 1.45 1.50 85.9 -1.42 -0.25 18.8 74 6 4 3 8 3 7 0  986 1201 B
4 1.42 1.61 101.2 -1.74 -0.18 20.1 74 10 8 6 7 5 6 0  986 1201 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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