PDBsum entry 4yjl Go to PDB code:  Pore analysis for: 4yjl calculated with MOLE 2.0 PDB id 4yjl Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 2.53 40.5 -0.58 -0.11 18.0 76 6 4 0 4 2 0 1  EDO 802 D 2 1.32 3.73 64.5 -0.86 -0.30 17.5 81 6 7 3 7 2 0 1  EDO 802 D 3 1.63 1.80 25.7 -1.40 -0.06 24.2 73 4 5 0 4 3 0 0   4 2.40 2.40 29.3 -0.89 -0.30 18.0 78 3 4 0 3 3 0 1  EDO 801 F 5 1.61 1.84 42.0 -0.81 -0.16 19.8 77 5 4 0 4 2 0 1  EDO 801 F 6 2.54 2.54 28.7 -0.58 -0.27 15.6 81 3 4 0 3 2 0 1  EDO 804 A 7 1.52 1.59 33.5 -1.85 -0.55 27.8 84 4 2 0 3 0 0 0   8 1.59 1.69 28.0 -2.64 -0.54 41.5 76 4 5 1 1 0 0 1   9 3.34 3.34 32.8 -1.83 -0.48 32.6 86 4 6 0 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.