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PDBsum entry 4ybk
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Tunnel analysis for: 4ybk calculated with  MOLE 2.0
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PDB id
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4ybk
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.22 |
16.3 |
-0.36 |
-0.20 |
6.9 |
75 |
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0 |
2 |
1 |
1 |
3 |
1 |
0 |
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2 |
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2.15 |
3.90 |
17.5 |
-0.30 |
-0.22 |
18.2 |
88 |
1 |
2 |
1 |
6 |
0 |
0 |
0 |
4B7 601 A
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3 |
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1.35 |
2.04 |
22.4 |
0.49 |
-0.17 |
2.8 |
76 |
1 |
0 |
1 |
5 |
1 |
0 |
0 |
4B7 601 A
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4 |
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2.11 |
3.34 |
22.6 |
-0.91 |
-0.26 |
19.7 |
87 |
3 |
1 |
2 |
5 |
0 |
0 |
1 |
4B7 601 A
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5 |
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1.96 |
2.18 |
22.8 |
0.21 |
-0.08 |
14.7 |
86 |
1 |
2 |
1 |
8 |
0 |
0 |
0 |
4B7 601 A
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6 |
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1.36 |
1.97 |
23.5 |
0.44 |
-0.14 |
4.7 |
83 |
2 |
1 |
1 |
5 |
1 |
0 |
0 |
4B7 601 A
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7 |
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1.89 |
2.13 |
27.9 |
-0.47 |
-0.14 |
17.5 |
85 |
3 |
1 |
2 |
7 |
0 |
0 |
1 |
4B7 601 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program