PDBsum entry 4ya0 Go to PDB code:  Pore analysis for: 4ya0 calculated with MOLE 2.0 PDB id 4ya0 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 2.14 82.1 -2.66 -0.46 27.4 76 12 6 4 1 6 0 0   2 1.60 2.16 90.6 -1.79 -0.27 21.1 77 10 6 7 5 6 1 1   3 1.74 2.00 107.1 -2.02 -0.40 22.6 77 16 7 5 4 7 1 1   4 1.64 1.81 111.8 -1.47 -0.22 21.2 76 12 9 7 8 12 1 1   5 1.64 1.81 115.3 -2.07 -0.34 25.5 78 13 10 7 4 8 1 0   6 1.70 2.89 116.5 -2.09 -0.40 24.1 78 18 8 6 4 8 0 1   7 1.50 1.73 123.2 -1.21 -0.17 18.6 80 13 8 7 9 8 1 0   8 1.55 1.73 124.4 -1.38 -0.24 19.0 79 18 6 6 9 8 0 1   9 1.76 2.06 130.0 -1.54 -0.40 17.6 81 10 4 8 8 6 0 0   10 1.61 2.17 133.6 -1.25 -0.34 15.7 82 12 5 10 11 6 1 1   11 1.66 2.12 133.0 -1.32 -0.31 15.8 83 12 6 11 11 6 0 1   12 1.76 1.81 139.2 -1.52 -0.22 17.8 74 14 5 8 8 11 2 0   13 1.76 1.82 147.2 -1.80 -0.34 22.2 77 18 9 8 7 8 2 0   14 1.71 2.75 144.8 -1.75 -0.42 19.0 82 15 8 8 7 6 0 0   15 1.20 1.18 149.4 -1.83 -0.31 22.8 81 15 14 12 9 9 1 0   16 1.51 1.74 152.7 -1.12 -0.27 14.4 84 15 6 8 12 6 0 0   17 1.65 1.81 157.8 -1.25 -0.22 17.1 80 12 10 10 10 10 1 0   18 1.20 1.16 162.8 -1.56 -0.38 18.2 86 13 11 14 13 4 0 0   19 1.78 3.20 179.4 -1.07 -0.25 15.0 78 14 6 10 13 10 2 0   20 1.62 2.27 177.4 -2.03 -0.41 19.9 81 16 4 14 7 8 0 1   21 1.71 2.40 190.7 -1.78 -0.36 19.1 81 20 6 16 10 8 2 2   22 1.98 2.18 189.2 -2.54 -0.52 23.2 81 19 6 11 3 8 0 0   23 1.70 1.85 198.4 -1.86 -0.30 19.3 79 15 8 14 6 12 1 0   24 1.76 2.31 205.8 -1.70 -0.29 19.0 80 18 9 15 9 12 2 1   25 1.18 1.14 207.2 -2.23 -0.47 21.6 84 17 9 17 9 6 0 0   26 1.47 1.69 208.6 -2.04 -0.43 21.0 83 25 7 9 7 7 0 0   27 1.75 3.10 215.3 -2.22 -0.47 21.9 82 26 8 13 6 7 2 0   28 1.64 1.81 214.8 -2.10 -0.36 22.8 80 21 11 12 5 12 1 0   29 1.55 2.78 236.5 -1.61 -0.30 18.4 79 22 7 16 12 12 2 1   30 1.64 1.86 251.6 -1.46 -0.22 17.9 77 20 10 15 11 16 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.