PDBsum entry 4y8q Go to PDB code:  Tunnel analysis for: 4y8q calculated with MOLE 2.0 PDB id 4y8q Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.07 1.49 33.8 -2.41 -0.58 27.9 78 5 3 2 1 1 0 0  MG 301 I 2 1.38 1.67 19.3 -1.52 -0.21 25.2 69 3 2 0 0 1 1 0   3 1.20 1.21 16.3 -0.12 -0.02 8.1 89 2 1 1 5 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.