PDBsum entry 4y80 Go to PDB code:  Pore analysis for: 4y80 calculated with MOLE 2.0 PDB id 4y80 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.73 34.0 -1.12 -0.25 13.3 74 3 3 3 1 4 1 0   2 1.98 1.98 65.8 -2.61 -0.64 27.0 83 8 7 6 1 1 1 0   3 1.37 1.44 81.8 -1.39 -0.30 18.6 77 9 9 7 5 6 3 0   4 1.40 1.42 107.0 -2.47 -0.55 30.0 82 12 11 8 6 2 1 0   5 1.52 2.97 105.6 -1.70 -0.23 20.4 81 13 8 10 7 6 1 0   6 1.75 1.97 108.3 -2.20 -0.39 24.2 80 13 6 9 5 8 0 0   7 1.43 1.41 116.3 -1.92 -0.36 23.2 79 13 10 9 10 7 1 1   8 1.40 1.42 118.9 -2.43 -0.45 26.5 79 16 10 7 6 7 0 0   9 1.41 1.42 137.5 -2.13 -0.37 25.2 82 16 10 10 10 6 0 0   10 1.38 2.43 139.6 -2.47 -0.51 30.0 80 18 11 8 5 5 1 0   11 1.53 2.92 162.7 -1.63 -0.22 19.4 77 18 9 12 9 10 2 0   12 1.39 1.33 169.5 -2.04 -0.42 22.8 82 19 11 15 11 7 0 0   13 1.48 2.26 185.9 -2.04 -0.37 25.1 77 21 13 11 8 9 3 0   14 1.43 1.38 192.5 -2.00 -0.37 24.7 77 18 15 9 11 7 2 0   15 1.69 2.45 196.3 -2.00 -0.38 21.6 82 20 7 14 8 9 1 1   16 1.81 3.35 201.6 -2.40 -0.45 25.2 83 20 8 12 4 9 0 0   17 1.80 3.42 202.3 -2.05 -0.36 23.2 84 20 8 14 7 9 0 0   18 1.43 1.46 207.4 -2.40 -0.46 24.3 83 18 9 16 11 8 0 0   19 1.52 1.69 217.1 -2.50 -0.51 27.4 83 22 11 14 6 6 1 0   20 1.43 1.38 216.5 -2.24 -0.38 23.2 84 21 10 17 11 7 0 0   21 1.46 1.39 226.8 -2.14 -0.40 23.1 85 21 11 19 12 8 0 0   22 1.44 1.39 231.0 -2.60 -0.54 27.8 84 23 14 16 11 4 1 0   23 1.81 1.92 242.6 -1.67 -0.28 18.9 79 23 9 17 11 13 3 1   24 1.89 3.00 248.6 -1.75 -0.25 20.5 80 23 10 17 10 13 2 0   25 1.81 1.92 247.9 -1.97 -0.33 21.5 78 23 10 14 7 13 2 0   26 1.80 3.57 257.3 -1.90 -0.34 23.0 80 22 13 13 8 10 2 0   27 1.53 1.73 263.4 -2.07 -0.38 23.3 80 25 13 17 9 10 3 0   28 1.44 1.48 262.5 -1.89 -0.31 21.2 81 24 13 19 14 12 2 0   29 1.41 1.42 286.4 -2.18 -0.46 22.2 84 27 15 26 20 6 0 0   30 1.83 2.11 303.6 -1.70 -0.27 20.7 77 25 15 16 11 14 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.