PDBsum entry 4y7n Go to PDB code:  Pore analysis for: 4y7n calculated with MOLE 2.0 PDB id 4y7n Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.70 35.0 -1.81 -0.51 26.1 86 6 5 3 3 0 1 0   2 3.27 3.43 37.6 -2.33 -0.49 22.4 85 5 2 5 1 1 0 0  DA 27 T DT 28 T 3 3.24 3.26 37.6 -0.82 -0.34 16.8 93 3 3 6 11 0 0 0   4 2.34 2.89 41.5 -1.90 -0.03 23.6 71 5 6 1 4 4 0 0   5 3.15 3.28 41.7 -1.57 -0.11 14.8 74 4 3 4 3 4 1 0   6 3.55 4.01 50.9 -1.15 -0.31 14.9 90 2 5 4 9 1 0 0   7 2.58 2.58 70.0 -2.31 -0.67 20.9 86 6 5 7 0 2 1 0  MG 1804 A A 1 R U 2 R G 3 R G 4 R A 5 R G 6 R A 7 R G 8 R G 9 R 1CC 19 T DC 20 T DC 21 T DT 22 T DC 23 T DC 26 T DA 27 T G2P 101 T 8 2.85 2.89 77.8 -1.17 -0.51 20.0 91 9 7 9 10 0 1 0   9 1.16 1.32 80.6 -1.45 -0.36 20.5 84 9 8 6 5 3 2 0   10 1.48 1.67 83.8 -1.79 -0.54 27.3 83 16 13 3 5 0 1 0   11 1.72 1.91 87.6 -1.81 -0.33 20.7 77 7 3 6 3 2 4 0  A 1 R U 2 R G 3 R G 4 R A 5 R DA 18 T 1CC 19 T DC 26 T DA 27 T 12 1.85 2.26 88.1 -2.08 -0.46 26.8 88 9 3 2 4 0 2 0   13 2.82 2.85 98.8 -1.39 -0.56 17.1 88 12 7 9 6 0 3 0  DG 10 N DA 10 T DG 11 T 14 2.47 2.43 102.8 -1.72 -0.38 27.1 83 13 6 2 6 1 0 0  DC 1 N A 1 R U 2 R G 3 R G 4 R A 5 R DG 14 T DG 17 T DA 18 T 1CC 19 T DC 26 T DA 27 T 15 1.65 1.64 102.0 -1.26 -0.59 13.4 82 5 6 6 6 1 4 0  DT 5 N DT 6 N DA 7 N DT 8 N DC 9 N DG 10 N DA 10 T DG 11 T DC 12 T DA 13 T DG 14 T DA 15 T 16 1.50 1.62 104.4 -1.18 -0.46 21.0 85 16 11 7 7 0 2 0   17 1.51 1.71 110.6 -1.66 -0.44 24.0 81 15 15 6 8 4 1 0   18 1.66 1.65 112.1 -1.38 -0.67 14.8 82 10 6 4 5 1 3 0  DT 5 N DT 6 N DA 7 N DT 8 N DA 10 T DG 11 T DC 12 T DA 13 T DG 14 T DA 15 T 19 1.50 1.70 115.6 -2.01 -0.63 25.7 84 14 16 8 5 0 3 0  DG 10 N DA 10 T DG 11 T 20 2.07 2.08 120.6 -1.68 -0.44 20.3 81 11 13 9 12 4 3 0  DG 10 N DA 10 T DG 11 T 21 1.89 1.87 128.8 -1.76 -0.46 22.4 88 11 13 12 8 2 1 0  DG 10 N DA 10 T DG 11 T 22 1.48 1.70 132.3 -1.68 -0.45 26.0 83 13 12 5 7 1 1 0  DC 1 N A 1 R U 2 R G 3 R G 4 R A 5 R DG 14 T DG 17 T DA 18 T 1CC 19 T DC 26 T DA 27 T 23 1.74 1.73 134.7 -0.88 -0.55 10.8 84 12 4 8 7 1 4 0  DT 5 N DT 6 N DA 7 N DT 8 N DA 10 T DG 11 T DC 12 T DA 13 T DG 14 T DA 15 T 24 1.89 1.87 138.9 -1.43 -0.34 19.9 84 12 14 10 12 6 0 0   25 2.61 2.63 140.8 -2.06 -0.49 24.1 84 13 8 8 6 1 4 0  DC 1 N DG 10 N A 1 R U 2 R G 3 R G 4 R A 5 R DA 10 T DG 11 T DG 14 T DG 17 T DA 18 T 1CC 19 T DC 26 T DA 27 T 26 1.43 1.40 157.8 -2.25 -0.48 24.5 85 11 9 10 3 1 1 0   27 1.92 1.93 166.2 -1.38 -0.33 21.2 87 12 11 9 12 3 0 0  DC 1 N A 1 R U 2 R G 3 R G 4 R A 5 R DG 14 T DG 17 T DA 18 T 1CC 19 T DC 26 T DA 27 T 28 1.79 1.79 162.8 -1.34 -0.45 17.2 86 11 10 10 9 3 2 0  DT 5 N DT 6 N DA 7 N DT 8 N DA 10 T DG 11 T DC 12 T DA 13 T DG 14 T DA 15 T 29 1.81 1.81 183.5 -1.39 -0.51 16.4 80 14 11 8 10 5 3 0  DT 5 N DT 6 N DA 7 N DT 8 N DA 10 T DG 11 T DC 12 T DA 13 T DG 14 T DA 15 T 30 1.55 1.52 188.4 -2.50 -0.57 30.0 83 14 12 8 3 1 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.