PDBsum entry 4y78 Go to PDB code:  Pore analysis for: 4y78 calculated with MOLE 2.0 PDB id 4y78 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.70 45.5 -1.77 -0.34 21.1 74 6 4 2 2 4 1 0   2 1.62 1.73 84.9 -2.66 -0.60 32.3 81 8 8 5 3 3 0 0   3 1.70 2.86 99.6 -2.52 -0.43 29.2 81 18 7 7 4 4 1 0   4 1.58 1.73 104.5 -2.33 -0.41 27.3 76 13 6 4 4 4 2 0   5 1.55 1.75 110.1 -2.54 -0.54 28.8 76 17 7 3 2 4 1 0   6 1.58 1.79 119.0 -2.13 -0.34 24.9 81 19 8 10 8 7 2 0   7 1.48 1.69 119.4 -1.80 -0.27 23.9 80 17 10 9 6 5 1 0   8 1.41 1.41 121.0 -2.21 -0.44 23.9 81 15 10 10 7 6 0 0   9 1.87 2.97 125.6 -2.61 -0.46 28.7 77 17 11 5 3 9 2 0   10 1.63 3.42 128.7 -2.51 -0.44 26.8 79 20 6 9 6 8 2 0   11 1.71 1.74 132.3 -1.41 -0.37 19.5 83 11 7 9 9 4 1 0   12 1.50 2.89 132.2 -1.63 -0.26 21.4 76 17 9 6 8 11 2 1   13 1.53 1.65 135.3 -1.71 -0.24 20.8 79 16 9 11 8 9 2 0   14 1.26 2.18 161.0 -1.56 -0.25 15.9 80 9 4 14 7 10 3 0   15 1.47 2.93 161.8 -2.25 -0.40 23.8 78 15 11 11 7 10 1 0   16 2.07 2.18 191.7 -2.81 -0.59 27.8 82 19 8 9 2 7 0 0   17 2.01 3.59 198.9 -2.63 -0.51 25.7 81 18 7 12 4 9 1 0   18 1.78 1.95 204.2 -2.04 -0.33 22.3 81 19 10 14 5 10 1 0   19 1.57 2.89 206.4 -2.19 -0.45 23.3 82 22 8 11 6 8 1 1   20 1.20 1.51 206.0 -2.03 -0.42 21.5 81 20 6 10 9 6 1 0   21 1.74 1.85 211.4 -1.97 -0.29 21.0 80 18 9 16 7 13 2 0   22 1.61 2.51 213.6 -2.13 -0.39 22.3 81 21 7 13 8 10 2 1   23 1.57 1.69 214.6 -2.17 -0.38 24.4 82 21 9 13 7 7 2 0   24 1.43 1.40 213.2 -1.91 -0.35 20.3 80 19 5 13 11 8 2 0   25 1.74 2.01 213.0 -2.62 -0.48 27.3 84 27 7 15 5 8 1 0   26 1.86 1.84 220.2 -2.51 -0.43 25.8 82 26 6 17 7 10 2 0   27 1.37 1.30 229.2 -2.00 -0.34 22.0 84 21 12 20 13 9 1 0   28 1.44 3.01 244.8 -2.43 -0.46 24.9 82 22 9 16 6 9 0 0   29 1.48 2.89 251.9 -2.32 -0.42 23.5 81 21 8 18 8 11 1 0   30 1.44 3.00 256.5 -2.04 -0.31 22.4 82 22 12 19 9 12 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.