PDBsum entry 4y52 Go to PDB code:  Tunnel analysis for: 4y52 calculated with MOLE 2.0 PDB id 4y52 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.88 53.0 -2.18 -0.68 23.3 89 8 5 4 3 0 0 0  G 8 R G 9 R DT 22 T DC 23 T DT 24 T 2 1.46 1.47 57.7 -2.18 -0.61 22.7 86 13 4 6 1 0 2 0  G 8 R G 9 R DT 22 T DC 23 T DT 24 T 3 1.23 1.39 65.1 -2.19 -0.75 23.6 86 10 4 5 1 0 0 0  G 4 R A 5 R G 6 R G 8 R G 9 R 1CC 19 T DT 22 T DC 23 T DT 24 T DC 25 T 4 1.45 1.47 73.9 -1.89 -0.69 17.9 87 8 4 7 2 0 0 0  G 8 R G 9 R DT 22 T DC 23 T DT 24 T DC 25 T DC 26 T DA 27 T DT 28 T 5 1.24 2.17 17.0 -0.06 0.27 12.6 82 5 0 2 2 2 2 0   6 1.22 2.16 19.2 0.19 0.28 15.2 85 6 0 2 3 1 1 0   7 1.19 2.17 34.9 -1.10 -0.19 12.2 84 5 1 5 2 1 3 0   8 1.10 3.76 20.9 3.35 1.21 2.1 83 1 0 0 7 2 0 0   9 1.15 1.50 16.8 -1.37 -0.42 17.9 68 3 1 1 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.