spacer
spacer

PDBsum entry 4xzu

Go to PDB code: 
Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 4xzu calculated with MOLE 2.0 PDB id
4xzu
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 2.42 35.2 -1.69 -0.40 21.8 76 3 5 4 5 4 1 0  
2 2.69 2.85 36.1 -2.01 -0.18 19.9 73 7 1 5 2 5 1 0  
3 2.17 3.82 48.2 -1.21 -0.51 7.0 93 2 2 10 3 5 0 0  MG 2401 M
4 2.18 3.85 57.5 -1.39 -0.45 12.2 87 7 1 8 4 7 1 0  
5 1.22 1.49 61.4 -1.41 -0.14 16.2 80 5 5 9 4 5 3 0  
6 1.23 2.36 63.8 -1.36 -0.31 10.8 83 4 7 12 6 7 0 0  MG 2401 M
7 2.77 2.77 64.2 -0.83 -0.15 5.5 81 2 1 9 5 7 0 0  MG 2401 M
8 1.21 1.49 65.5 -1.30 -0.15 19.1 72 4 5 4 7 8 2 0  
9 2.17 3.80 76.3 -0.70 -0.40 5.4 90 2 1 10 5 7 0 0  
10 1.20 1.50 77.7 -1.12 -0.39 10.6 88 4 5 11 6 6 2 0  
11 3.01 3.78 79.5 -1.12 -0.17 10.9 80 7 0 8 7 9 1 0  
12 1.33 2.08 94.0 -0.92 -0.26 8.6 85 4 6 14 9 9 0 0  
13 3.57 3.86 27.9 -0.67 -0.50 7.7 81 0 1 1 1 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer