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PDBsum entry 4xzu

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protein metals Protein-protein interface(s) links
Immune system PDB id
4xzu

 

 

 

 

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Contents
Protein chains
213 a.a.
213 a.a.
154 a.a.
195 a.a.
Metals
_MG ×3
Waters ×241
PDB id:
4xzu
Name: Immune system
Title: Crystal structure of the human factor viii c2 domain in complex with murine 3e6 inhibitory antibody
Structure: 3e6 antibody fab heavy chain. Chain: a, e. 3e6 antibody fab light chain. Chain: b, f. Coagulation factor viii. Chain: m, g. Synonym: antihemophilic factor,ahf,procoagulant component. Engineered: yes
Source: Mus musculus. Organism_taxid: 10090. Homo sapiens. Human. Organism_taxid: 9606. Gene: f8, f8c. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.61Å     R-factor:   0.202     R-free:   0.267
Authors: P.C.Spiegel,M.E.Wuerth
Key ref: M.E.Wuerth et al. (2015). Structure of the Human Factor VIII C2 Domain in Complex with the 3E6 Inhibitory Antibody. Sci Rep, 5, 17216. PubMed id: 26598467 DOI: 10.1038/srep17216
Date:
05-Feb-15     Release date:   09-Dec-15    
PROCHECK
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 Headers
 References

Protein chains
No UniProt id for this chain
Struc: 213 a.a.
Protein chain
No UniProt id for this chain
Struc: 213 a.a.
Protein chains
Pfam   ArchSchema ?
P00451  (FA8_HUMAN) -  Coagulation factor VIII from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
2351 a.a.
154 a.a.
Protein chain
No UniProt id for this chain
Struc: 195 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
DOI no: 10.1038/srep17216 Sci Rep 5:17216 (2015)
PubMed id: 26598467  
 
 
Structure of the Human Factor VIII C2 Domain in Complex with the 3E6 Inhibitory Antibody.
M.E.Wuerth, R.K.Cragerud, P.C.Spiegel.
 
  ABSTRACT  
 
Blood coagulation factor VIII is a glycoprotein cofactor that is essential for the intrinsic pathway of the blood coagulation cascade. Inhibitory antibodies arise either spontaneously or in response to therapeutic infusion of functional factor VIII into hemophilia A patients, many of which are specific to the factor VIII C2 domain. The immune response is largely parsed into "classical" and "non-classical" inhibitory antibodies, which bind to opposing faces cooperatively. In this study, the 2.61 Å resolution structure of the C2 domain in complex with the antigen-binding fragment of the 3E6 classical inhibitory antibody is reported. The binding interface is largely conserved when aligned with the previously determined structure of the C2 domain in complex with two antibodies simultaneously. Further inspection of the B factors for the C2 domain in various X-ray crystal structures indicates that 3E6 antibody binding decreases the thermal motion behavior of surface loops in the C2 domain on the opposing face, thereby suggesting that cooperative antibody binding is a dynamic effect. Understanding the structural nature of the immune response to factor VIII following hemophilia A treatment will help lead to the development of better therapeutic reagents.
 

 

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