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PDBsum entry 4xvc

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4xvc calculated with MOLE 2.0 PDB id
4xvc
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.65 1.65 32.7 -1.28 -0.40 20.8 90 2 4 2 3 0 0 0  
2 2.44 2.45 33.9 -2.05 -0.52 31.9 82 3 7 0 4 0 0 0  
3 2.43 2.44 39.6 -2.11 -0.45 30.3 80 4 7 1 3 1 0 0  
4 2.12 2.15 46.8 -1.71 -0.55 19.8 88 4 4 2 4 0 1 0  
5 1.17 1.46 56.7 -2.56 -0.57 30.6 84 8 6 2 2 0 3 0  
6 1.46 1.47 68.1 -1.83 -0.50 20.2 88 5 5 4 6 1 1 0  
7 1.66 2.09 74.6 -1.64 -0.59 25.3 84 6 11 0 6 0 0 0  
8 1.76 1.93 76.1 -2.12 -0.49 29.1 83 6 9 3 6 2 0 0  
9 1.87 2.03 88.6 -2.07 -0.50 31.2 84 6 10 1 8 1 0 0  
10 1.47 1.46 103.0 -2.02 -0.56 25.9 86 8 10 2 8 1 1 0  
11 2.56 2.59 45.7 -2.06 -0.41 30.2 82 5 8 1 5 1 0 0  
12 1.40 1.61 40.6 -0.51 -0.32 13.5 82 2 2 0 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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