PDBsum entry 4xrz

Pore analysis for: 4xrz calculated with

MOLE 2.0

PDB id

4xrz

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

11 pores, coloured by radius

21 pores, coloured by radius

21 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.71

1.71

25.2

-2.51

-0.39

24.7

78

4

1

2

0

1

1

0

2

1.71

1.72

40.9

-2.27

-0.40

23.2

82

4

1

2

2

1

1

0

3

1.21

1.55

50.5

1.21

0.22

6.5

76

2

2

1

13

3

1

1

HEM 601 A SI6 602 A

4

1.25

1.54

53.8

0.15

-0.11

8.6

77

1

2

2

12

2

4

1

HEM 601 A SI6 602 A

5

1.36

1.58

56.6

0.82

0.07

8.4

77

1

3

3

13

2

0

2

HEM 601 C SI6 602 C GOL 606 C

6

1.34

1.62

57.0

0.27

-0.04

8.2

79

2

3

2

11

2

2

1

HEM 601 C SI6 602 C GOL 606 C

7

2.50

3.62

57.5

-0.94

-0.28

13.7

83

6

3

8

3

3

3

0

8

1.93

3.04

42.3

-0.82

-0.29

13.2

87

2

2

2

5

0

2

0

9

2.21

2.38

44.1

-2.14

-0.49

18.0

84

4

3

5

1

0

1

1

10

1.93

2.90

47.0

-1.35

-0.42

14.4

83

3

2

3

2

2

2

0

11

1.30

1.53

57.2

1.08

0.22

7.9

76

2

3

1

15

2

1

1

HEM 601 D SI6 602 D

12

1.90

3.01

77.3

-1.64

-0.31

20.9

83

11

6

5

1

2

2

0

13

1.15

1.28

96.0

1.59

0.48

4.3

72

2

1

2

11

3

0

0

14

1.56

2.87

29.0

0.70

0.10

5.3

80

0

1

1

3

3

2

0

15

1.19

1.39

44.6

-0.54

-0.20

14.8

80

2

3

3

7

1

2

0

SI6 602 B GOL 605 B

16

1.18

1.38

47.2

0.08

0.05

16.1

75

2

4

2

10

4

0

0

SI6 602 B GOL 605 B

17

1.29

1.62

50.9

0.70

0.04

5.5

79

1

1

2

11

2

3

1

HEM 601 B SI6 602 B

18

1.17

1.39

57.3

0.40

0.00

11.1

75

3

3

3

13

2

1

1

HEM 601 B SI6 602 B GOL 605 B

19

1.10

2.39

57.7

0.78

0.13

7.8

74

2

2

4

15

3

0

1

HEM 601 B SI6 602 B GOL 605 B

20

1.13

2.47

62.0

1.09

0.26

6.8

75

2

2

3

15

5

0

1

HEM 601 B SI6 602 B

21

1.35

1.64

62.9

1.33

0.33

6.7

76

2

2

1

13

5

1

1

HEM 601 B SI6 602 B

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.