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PDBsum entry 4xpi
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Pore analysis for: 4xpi calculated with  MOLE 2.0
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PDB id
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4xpi
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.77 |
4.77 |
35.1 |
-2.54 |
-0.54 |
30.6 |
74 |
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7 |
4 |
2 |
0 |
3 |
1 |
0 |
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2 |
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1.19 |
1.19 |
48.7 |
-3.11 |
-0.76 |
38.6 |
86 |
6 |
9 |
4 |
1 |
1 |
0 |
0 |
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3 |
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3.06 |
4.02 |
70.0 |
-1.66 |
-0.28 |
26.2 |
73 |
9 |
6 |
1 |
6 |
4 |
2 |
0 |
GOL 601 D
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4 |
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1.56 |
2.85 |
84.6 |
-2.15 |
-0.65 |
26.5 |
82 |
8 |
11 |
9 |
5 |
2 |
2 |
0 |
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5 |
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1.57 |
2.92 |
85.4 |
-2.37 |
-0.72 |
28.0 |
81 |
8 |
11 |
8 |
4 |
2 |
2 |
0 |
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6 |
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1.68 |
1.65 |
114.4 |
-2.16 |
-0.60 |
24.3 |
83 |
12 |
14 |
8 |
5 |
3 |
2 |
0 |
GOL 601 D
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7 |
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1.62 |
2.60 |
114.0 |
-2.25 |
-0.62 |
26.4 |
82 |
11 |
14 |
7 |
5 |
3 |
2 |
0 |
GOL 601 D
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8 |
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1.15 |
1.43 |
126.2 |
-1.50 |
-0.36 |
23.1 |
81 |
12 |
10 |
8 |
9 |
4 |
2 |
0 |
GOL 603 B GOL 603 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program