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PDBsum entry 4xic

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Top Page protein dna_rna ligands metals pores links
Pore analysis for: 4xic calculated with MOLE 2.0 PDB id
4xic
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 1.71 47.9 -1.55 -0.30 20.5 82 4 1 2 2 1 0 0  DA 3 E DA 4 E DG 5 E DC 6 E C2S 7 E DA 8 E DT 9 E
DC 26 F DT 27 F DT 30 F DG 31 F DG 32 F DC 33 F
2 1.58 1.68 49.6 -1.72 -0.18 19.8 76 5 0 2 2 2 0 0  DC 6 B DT 36 C DA 3 E DA 4 E DG 5 E DC 6 E C2S 7
E DA 8 E DT 9 E DT 30 F DG 31 F DG 32 F DC 33 F
3 2.93 2.99 54.4 -1.31 -0.58 13.6 78 3 1 0 0 1 0 0  DA 3 B DA 4 B DC 6 B DC 33 C DT 35 C DT 36 C DC
37 C MPD 101 C DT 9 E DT 10 E DT 23 F DC 24 F DT
25 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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