PDBsum entry 4xf2

Pore analysis for: 4xf2 calculated with

MOLE 2.0

PDB id

4xf2

Pores calculated on whole structure

Pores calculated excluding ligands

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15 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.13

2.53

37.9

1.56

0.41

3.9

78

3

1

0

11

1

1

0

2

1.22

3.07

40.4

1.07

0.63

3.6

76

0

1

4

9

5

2

0

3

1.25

1.50

50.1

0.46

0.29

11.3

74

2

2

1

9

2

1

1

4

1.29

1.32

51.7

-1.70

-0.22

24.5

79

4

2

2

3

2

1

0

5

1.23

1.45

61.8

-0.07

-0.14

11.1

81

5

3

3

13

0

1

1

6

1.32

2.11

63.7

1.70

0.60

6.3

72

3

2

0

15

4

1

1

7

1.27

2.09

64.2

1.90

0.66

4.8

73

1

3

0

17

5

1

1

8

1.65

1.89

71.9

-1.99

-0.33

24.9

76

6

6

1

3

3

1

0

9

1.61

2.90

78.1

-1.54

-0.57

16.7

87

9

4

11

6

2

2

1

10

1.30

1.30

84.4

1.63

0.56

7.8

78

3

2

1

21

5

0

1

11

1.32

1.32

126.9

-1.05

-0.16

19.1

81

6

10

6

7

4

1

0

12

1.33

3.38

134.9

-1.06

-0.11

18.8

79

6

10

5

9

5

2

0

13

1.09

1.11

174.8

-1.20

-0.10

18.4

80

14

5

11

12

6

3

0

14

1.31

1.58

237.2

-0.12

0.11

17.2

79

18

10

8

34

11

1

0

15

1.32

1.33

259.5

-1.19

-0.21

23.1

82

21

15

13

22

3

4

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.