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PDBsum entry 4x9f
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Pore analysis for: 4x9f calculated with  MOLE 2.0
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PDB id
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4x9f
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.69 |
4.89 |
38.7 |
-2.20 |
-0.39 |
31.5 |
77 |
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7 |
5 |
1 |
1 |
2 |
2 |
0 |
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2 |
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1.57 |
1.69 |
42.0 |
-0.71 |
-0.26 |
7.8 |
87 |
1 |
2 |
3 |
4 |
2 |
1 |
0 |
GOL 409 A GOL 410 A
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3 |
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2.36 |
2.85 |
44.2 |
-2.54 |
-0.69 |
30.0 |
84 |
8 |
6 |
3 |
1 |
0 |
0 |
0 |
NAG 1 F NAG 2 F BMA 3 F MAN 4 F
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4 |
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1.68 |
1.80 |
47.6 |
-0.93 |
-0.40 |
10.2 |
87 |
2 |
4 |
5 |
5 |
1 |
1 |
0 |
GOL 409 A GOL 410 A
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5 |
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2.04 |
2.24 |
48.6 |
-2.48 |
-0.70 |
27.7 |
83 |
6 |
6 |
3 |
1 |
0 |
2 |
0 |
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6 |
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1.68 |
1.80 |
50.4 |
-1.26 |
-0.45 |
17.4 |
84 |
4 |
5 |
6 |
5 |
1 |
1 |
0 |
GOL 409 A GOL 410 A
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7 |
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1.57 |
1.69 |
51.0 |
-0.95 |
-0.37 |
10.7 |
85 |
3 |
4 |
3 |
5 |
1 |
2 |
0 |
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8 |
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1.58 |
1.74 |
61.1 |
-1.40 |
-0.47 |
16.1 |
83 |
5 |
6 |
6 |
5 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program