 |
PDBsum entry 4x6z
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4x6z calculated with MOLE 2.0
|
PDB id
|
|
|
|
4x6z
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 tunnels,
coloured by tunnel radius |
 |
35 tunnels,
coloured by
tunnel radius
|
35 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.27 |
1.21 |
67.3 |
-0.57 |
-0.22 |
9.0 |
83 |
 |
2 |
2 |
7 |
7 |
5 |
2 |
0 |
 |
GOL 303 2 GOL 303 N MPD 201 V MG 206 V
|
 |
 |
2 |
 |
1.27 |
1.20 |
77.7 |
-0.74 |
-0.22 |
9.0 |
84 |
3 |
3 |
9 |
7 |
5 |
2 |
0 |
GOL 303 2 MG 204 H MG 205 H GOL 303 N MPD 201 V
|
 |
3 |
 |
1.33 |
1.44 |
95.6 |
-1.32 |
-0.45 |
15.5 |
82 |
8 |
7 |
6 |
8 |
6 |
2 |
0 |
MPD 301 M MG 304 M MG 307 M MG 305 N GOL 301 W
|
 |
4 |
 |
1.39 |
1.47 |
100.4 |
-1.40 |
-0.51 |
16.4 |
82 |
9 |
8 |
6 |
5 |
4 |
1 |
0 |
MPD 301 1 MG 307 M MG 305 N GOL 202 V GOL 302 Z
|
 |
5 |
 |
1.39 |
1.47 |
102.9 |
-1.34 |
-0.49 |
17.1 |
82 |
8 |
8 |
6 |
5 |
4 |
1 |
0 |
MPD 301 L MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
6 |
 |
1.19 |
1.30 |
106.9 |
-1.32 |
-0.35 |
9.4 |
79 |
6 |
4 |
8 |
6 |
8 |
3 |
0 |
MPD 301 2 GOL 303 2 MG 304 2 GOL 303 N MG 305 N G OL 202 V MG 207 V
|
 |
7 |
 |
1.33 |
1.44 |
109.7 |
-1.41 |
-0.45 |
16.2 |
84 |
8 |
7 |
9 |
9 |
6 |
2 |
0 |
MPD 301 1 GOL 303 1 MG 307 M MG 305 N GOL 202 V
|
 |
8 |
 |
1.39 |
1.46 |
126.6 |
-2.30 |
-0.51 |
26.4 |
80 |
13 |
10 |
7 |
4 |
5 |
2 |
0 |
MPD 301 1 MG 308 2 MG 307 M MG 305 N GOL 202 V G OL 202 X
|
 |
9 |
 |
1.38 |
1.50 |
126.2 |
-1.76 |
-0.40 |
20.4 |
79 |
12 |
9 |
8 |
6 |
7 |
2 |
1 |
MPD 301 1 MG 307 M MG 305 N GOL 302 O GOL 202 V G OL 202 X
|
 |
10 |
 |
1.38 |
1.52 |
132.6 |
-2.28 |
-0.46 |
26.1 |
80 |
14 |
10 |
8 |
6 |
5 |
1 |
0 |
MPD 301 1 MG 308 2 MG 307 M MG 305 N GOL 202 V G OL 202 X
|
 |
11 |
 |
1.38 |
1.54 |
133.6 |
-1.95 |
-0.40 |
21.3 |
81 |
10 |
8 |
9 |
6 |
7 |
1 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 304 T GOL 202 V G OL 202 X GOL 303 Z MG 306 Z
|
 |
12 |
 |
1.38 |
1.53 |
135.0 |
-2.03 |
-0.45 |
22.2 |
82 |
11 |
11 |
9 |
4 |
6 |
1 |
0 |
MPD 301 1 MG 307 M MG 305 N GOL 202 V GOL 202 X G OL 303 Z MG 306 Z
|
 |
13 |
 |
1.38 |
1.48 |
135.3 |
-2.10 |
-0.48 |
23.3 |
81 |
13 |
11 |
9 |
3 |
8 |
1 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 302 Q GOL 202 V G OL 202 X
|
 |
14 |
 |
1.37 |
1.50 |
135.0 |
-2.20 |
-0.47 |
24.9 |
80 |
15 |
10 |
8 |
4 |
8 |
3 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 301 R GOL 202 V G OL 202 X
|
 |
15 |
 |
1.38 |
1.54 |
135.4 |
-1.86 |
-0.51 |
18.8 |
82 |
11 |
10 |
10 |
4 |
6 |
1 |
0 |
MPD 301 1 MG 307 M MG 305 N GOL 202 V MPD 201 X G OL 202 X MG 205 X
|
 |
16 |
 |
1.38 |
1.54 |
135.6 |
-2.23 |
-0.55 |
23.7 |
82 |
13 |
9 |
9 |
4 |
5 |
1 |
0 |
GOL 301 A GOL 302 G MPD 301 M MG 307 M MG 305 N MG 307 N GOL 202 V
|
 |
17 |
 |
1.38 |
1.54 |
141.0 |
-1.84 |
-0.44 |
18.8 |
83 |
11 |
6 |
9 |
7 |
6 |
1 |
0 |
MPD 301 M GOL 302 M MG 307 M MG 305 N GOL 202 V
|
 |
18 |
 |
1.38 |
1.50 |
142.6 |
-1.75 |
-0.45 |
18.4 |
82 |
12 |
8 |
9 |
4 |
6 |
1 |
0 |
GOL 302 F MPD 301 M GOL 302 M MG 307 M MG 305 N G OL 202 V
|
 |
19 |
 |
1.38 |
1.48 |
141.9 |
-1.94 |
-0.45 |
20.0 |
81 |
15 |
8 |
11 |
6 |
7 |
2 |
0 |
GOL 301 A GOL 304 A GOL 301 G GOL 302 G MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
20 |
 |
1.38 |
1.47 |
146.0 |
-2.18 |
-0.45 |
25.8 |
80 |
15 |
11 |
8 |
4 |
7 |
3 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 301 R GOL 202 V G OL 202 X
|
 |
21 |
 |
1.41 |
1.51 |
154.2 |
-1.88 |
-0.35 |
22.8 |
80 |
15 |
8 |
7 |
6 |
8 |
2 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 301 R GOL 202 X MG 305 Z
|
 |
22 |
 |
1.21 |
1.84 |
151.3 |
-1.71 |
-0.43 |
20.9 |
81 |
14 |
9 |
13 |
6 |
7 |
2 |
0 |
MPD 301 1 MG 307 M MG 305 N GOL 202 V GOL 202 X
|
 |
23 |
 |
1.38 |
1.48 |
150.7 |
-2.12 |
-0.52 |
22.0 |
83 |
18 |
8 |
11 |
5 |
6 |
2 |
0 |
MG 301 C MG 302 D MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
24 |
 |
1.40 |
1.50 |
151.2 |
-2.11 |
-0.53 |
22.2 |
83 |
15 |
9 |
11 |
4 |
7 |
1 |
0 |
MG 302 C MG 204 J MG 206 J MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
25 |
 |
1.37 |
1.48 |
151.2 |
-1.79 |
-0.50 |
16.9 |
83 |
12 |
8 |
11 |
4 |
6 |
1 |
0 |
GOL 202 J MG 204 J MPD 301 M MG 307 M MG 305 N G OL 202 V
|
 |
26 |
 |
1.38 |
1.48 |
155.5 |
-1.97 |
-0.51 |
21.4 |
84 |
16 |
12 |
10 |
4 |
4 |
1 |
0 |
MG 302 D MG 305 L MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
27 |
 |
1.23 |
1.80 |
157.2 |
-1.57 |
-0.47 |
17.5 |
82 |
14 |
8 |
11 |
6 |
6 |
2 |
0 |
GOL 301 A GOL 302 G MPD 301 M MG 307 M MG 305 N G OL 202 V GOL 301 W
|
 |
28 |
 |
1.41 |
1.57 |
158.9 |
-1.90 |
-0.43 |
19.6 |
84 |
16 |
5 |
9 |
6 |
6 |
1 |
0 |
GOL 301 D MG 302 D MG 305 L MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
29 |
 |
1.18 |
1.26 |
161.7 |
-1.78 |
-0.57 |
18.5 |
83 |
15 |
9 |
11 |
6 |
5 |
1 |
0 |
GOL 301 A GOL 302 G MPD 301 M MG 307 M MG 305 N G OL 202 V
|
 |
30 |
 |
1.41 |
1.57 |
168.1 |
-2.50 |
-0.49 |
28.8 |
78 |
19 |
11 |
7 |
4 |
8 |
3 |
0 |
MPD 301 1 MG 307 M MG 305 N MG 301 R GOL 202 V G OL 202 X
|
 |
31 |
 |
1.41 |
1.57 |
168.3 |
-2.34 |
-0.50 |
25.2 |
81 |
20 |
9 |
9 |
4 |
6 |
1 |
0 |
GOL 301 D MG 302 D MG 305 L MPD 301 M MG 307 M MG 305 N GOL 202 V
|
 |
32 |
 |
1.21 |
1.23 |
170.3 |
-2.17 |
-0.49 |
22.1 |
81 |
14 |
10 |
14 |
6 |
7 |
1 |
0 |
GOL 301 A GOL 303 F GOL 304 F GOL 302 G MPD 301 M MG 307 M MG 305 N GOL 202 V GOL 301 W
|
 |
33 |
 |
1.21 |
2.13 |
19.7 |
-0.15 |
0.24 |
2.7 |
81 |
1 |
0 |
2 |
1 |
2 |
1 |
0 |
|
 |
34 |
 |
1.11 |
1.75 |
20.3 |
-0.32 |
0.08 |
2.7 |
88 |
1 |
0 |
4 |
2 |
2 |
1 |
0 |
|
 |
35 |
 |
2.00 |
2.18 |
17.4 |
0.66 |
0.22 |
17.0 |
83 |
2 |
2 |
0 |
3 |
0 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |