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PDBsum entry 4x48

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4x48 calculated with MOLE 2.0 PDB id
4x48
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.06 1.06 30.3 0.19 -0.01 7.6 78 1 3 1 5 2 0 0  GLU 801 B
2 1.04 1.04 36.3 -0.96 -0.23 19.4 81 3 3 2 3 2 0 0  GLU 801 B
3 1.85 1.85 28.4 -1.81 -0.76 20.6 84 2 2 1 2 0 0 0  
4 1.13 1.23 15.2 -0.08 0.05 5.3 78 1 1 1 3 3 1 0  
5 1.34 1.34 16.3 -1.56 -0.50 8.1 62 2 0 1 0 2 0 0  
6 1.22 1.22 23.9 0.69 0.27 6.5 89 2 0 0 7 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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