spacer
spacer

PDBsum entry 4x1k

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4x1k calculated with MOLE 2.0 PDB id
4x1k
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.22 4.35 36.1 -1.44 -0.53 15.6 82 3 2 4 2 1 1 0  
2 2.74 3.42 39.7 -1.49 -0.62 13.8 84 3 3 5 1 1 1 0  
3 3.09 3.42 108.2 -2.07 -0.73 23.4 86 8 7 8 2 1 2 0  3WZ 503 B
4 2.18 3.32 162.8 -1.73 -0.71 16.8 84 6 10 8 3 2 4 0  
5 2.26 2.27 179.0 -1.65 -0.65 16.2 80 7 10 9 4 4 5 0  
6 2.25 2.25 32.6 -1.28 -0.48 10.7 86 3 2 6 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer