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PDBsum entry 4x08

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4x08 calculated with MOLE 2.0 PDB id
4x08
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.42 18.1 -0.77 -0.20 8.9 83 2 0 2 3 1 3 0  
2 1.26 2.42 23.0 -0.78 -0.29 5.5 85 2 0 3 3 1 3 0  SO4 208 B
3 1.22 1.25 36.1 0.27 0.22 5.8 83 2 0 2 7 5 2 0  
4 1.26 2.41 40.8 -0.08 -0.26 5.1 86 2 1 4 5 3 3 0  
5 1.26 2.41 40.8 -0.25 -0.18 6.4 82 2 1 4 6 5 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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