 |
PDBsum entry 4ww0
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4ww0 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4ww0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
8 tunnels,
coloured by tunnel radius |
 |
9 tunnels,
coloured by
tunnel radius
|
9 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.65 |
1.94 |
39.0 |
-1.29 |
-0.31 |
22.4 |
74 |
 |
5 |
5 |
0 |
4 |
2 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.70 |
1.99 |
44.0 |
-1.73 |
-0.34 |
25.2 |
73 |
7 |
5 |
0 |
2 |
3 |
5 |
0 |
|
 |
3 |
 |
1.67 |
1.95 |
45.8 |
-1.98 |
-0.39 |
28.0 |
75 |
8 |
8 |
1 |
2 |
3 |
2 |
0 |
|
 |
4 |
 |
1.65 |
1.95 |
45.9 |
-2.07 |
-0.49 |
25.4 |
79 |
8 |
5 |
2 |
1 |
2 |
3 |
0 |
|
 |
5 |
 |
1.69 |
1.96 |
47.6 |
-2.13 |
-0.58 |
22.6 |
76 |
7 |
5 |
2 |
1 |
2 |
4 |
0 |
|
 |
6 |
 |
1.68 |
1.98 |
49.3 |
-2.10 |
-0.47 |
24.3 |
75 |
8 |
5 |
0 |
1 |
2 |
4 |
0 |
|
 |
7 |
 |
1.66 |
1.94 |
50.0 |
-1.94 |
-0.57 |
25.6 |
76 |
7 |
7 |
0 |
2 |
2 |
2 |
0 |
|
 |
8 |
 |
1.69 |
1.97 |
59.7 |
-2.09 |
-0.30 |
22.9 |
75 |
11 |
7 |
2 |
0 |
5 |
3 |
0 |
|
 |
9 |
 |
1.26 |
1.26 |
15.4 |
-1.23 |
0.17 |
24.0 |
79 |
3 |
2 |
0 |
4 |
1 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |