PDBsum entry 4wv1

Tunnel analysis for: 4wv1 calculated with

MOLE 2.0

PDB id

4wv1

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

8 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.06

1.06

18.5

-0.11

-0.35

7.2

73

1

2

2

3

2

1

0

2

1.15

1.15

22.4

0.50

-0.14

2.1

66

0

0

2

3

3

1

1

3

1.07

1.07

17.0

-0.47

-0.41

10.1

73

1

3

2

3

2

1

0

4

1.06

1.06

19.3

-0.01

-0.34

6.8

63

1

0

1

3

2

1

1

5

1.07

1.07

20.8

-0.41

-0.42

9.9

75

1

1

3

3

2

1

0

6

1.06

1.06

21.7

-0.36

-0.24

11.2

67

2

2

1

4

3

1

0

7

1.18

1.18

21.8

0.45

-0.10

3.2

71

1

0

2

4

2

1

1

8

1.23

2.59

29.0

-0.14

-0.50

2.0

97

0

0

7

4

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.