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PDBsum entry 4wv1

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protein Protein-protein interface(s) links
Transferase/immune system PDB id
4wv1

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
98 a.a.
224 a.a.
214 a.a.
Waters ×149
PDB id:
4wv1
Name: Transferase/immune system
Title: Crystal structure of the fgfr2 d2 domain in complex with fab 2b.1.3
Structure: Fibroblast growth factor receptor 2. Chain: f, c. Fragment: unp residues 153-251. Synonym: fgfr-2,k-sam,kgfr,keratinocyte growth factor receptor. Engineered: yes. Fab heavy chain. Chain: b, e. Engineered: yes. Fab light chain.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: fgfr2, bek, kgfr, ksam. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562
Resolution:
2.36Å     R-factor:   0.201     R-free:   0.244
Authors: Y.Yin,P.J.Carter
Key ref: Y.Yin et al. (2015). Redesigning a Monospecific Anti-FGFR3 Antibody to Add Selectivity for FGFR2 and Expand Antitumor Activity. Mol Cancer Ther, 14, 2270-2278. PubMed id: 26269606 DOI: 10.1158/1535-7163.MCT-14-1050
Date:
04-Nov-14     Release date:   16-Sep-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P21802  (FGFR2_HUMAN) -  Fibroblast growth factor receptor 2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
821 a.a.
98 a.a.
Protein chains
No UniProt id for this chain
Struc: 224 a.a.
Protein chains
No UniProt id for this chain
Struc: 214 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains F, C: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1158/1535-7163.MCT-14-1050 Mol Cancer Ther 14:2270-2278 (2015)
PubMed id: 26269606  
 
 
Redesigning a Monospecific Anti-FGFR3 Antibody to Add Selectivity for FGFR2 and Expand Antitumor Activity.
Y.Yin, S.Djakovic, S.Marsters, J.Tien, J.Peng, J.Tremayne, G.Lee, R.M.Neve, Y.Wu, M.Merchant, A.Ashkenazi, P.J.Carter.
 
  ABSTRACT  
 
FGF receptors (FGFR) are attractive candidate targets for cancer therapy because they are dysregulated in several human malignancies. FGFR2 and FGFR3 can be inhibited potentially without disrupting adult tissue homeostasis. In contrast, blocking the closely related FGFR1 and FGFR4, which regulate specific metabolic functions, carries a greater safety risk. An anti-FGFR3 antibody was redesigned here to create function-blocking antibodies that bind with dual specificity to FGFR3 and FGFR2 but spare FGFR1 and FGFR4. R3Mab, a previously developed monospecific anti-FGFR3 antibody, was modified via structure-guided phage display and acquired additional binding to FGFR2. The initial variant was trispecific, binding tightly to FGFR3 and FGFR2 and moderately to FGFR4, while sparing FGFR1. The X-ray crystallographic structure indicated that the antibody variant was bound to a similar epitope on FGFR2 as R3Mab on FGFR3. The antibody was further engineered to decrease FGFR4-binding affinity while retaining affinity for FGFR3 and FGFR2. The resulting dual-specific antibodies blocked FGF binding to FGFR3 and FGFR2 and inhibited downstream signaling. Moreover, they displayed efficacy in mice against human tumor xenografts overexpressing FGFR3 or FGFR2. Thus, a monospecific antibody can be exquisitely tailored to confer or remove binding to closely related targets to expand and refine therapeutic potential. Mol Cancer Ther; 14(10); 2270-8. ©2015 AACR.
 

 

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