 |
PDBsum entry 4whv
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4whv calculated with MOLE 2.0
|
PDB id
|
|
|
|
4whv
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 pores,
coloured by radius |
 |
9 pores,
coloured by radius
|
9 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.53 |
2.10 |
56.9 |
-2.00 |
-0.59 |
19.2 |
89 |
 |
6 |
3 |
10 |
2 |
1 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.83 |
1.94 |
73.0 |
-1.74 |
-0.50 |
16.4 |
87 |
6 |
6 |
7 |
4 |
0 |
2 |
0 |
|
 |
3 |
 |
1.50 |
1.69 |
80.4 |
-1.28 |
-0.26 |
16.4 |
86 |
7 |
8 |
5 |
9 |
1 |
1 |
0 |
|
 |
4 |
 |
1.86 |
1.87 |
95.8 |
-1.17 |
-0.33 |
18.1 |
83 |
6 |
7 |
8 |
8 |
1 |
2 |
0 |
|
 |
5 |
 |
1.92 |
3.99 |
124.1 |
-1.87 |
-0.41 |
23.2 |
82 |
8 |
11 |
6 |
8 |
2 |
1 |
0 |
|
 |
6 |
 |
1.54 |
1.73 |
145.2 |
-1.33 |
-0.35 |
18.3 |
87 |
9 |
10 |
10 |
13 |
1 |
0 |
0 |
|
 |
7 |
 |
1.79 |
1.92 |
149.8 |
-2.03 |
-0.57 |
24.9 |
79 |
9 |
11 |
6 |
7 |
3 |
4 |
0 |
|
 |
8 |
 |
1.90 |
1.98 |
165.9 |
-2.11 |
-0.59 |
25.6 |
82 |
11 |
15 |
9 |
9 |
3 |
0 |
0 |
|
 |
9 |
 |
1.40 |
1.43 |
174.4 |
-1.33 |
-0.48 |
12.7 |
87 |
6 |
8 |
14 |
11 |
2 |
4 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |