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PDBsum entry 4wc7
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Pore analysis for: 4wc7 calculated with MOLE 2.0 PDB id
4wc7
Pores calculated on whole structure Pores calculated excluding ligands
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12 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.80 34.4 -2.16 -0.51 30.8 79 7 4 0 1 1 0 0  CTP 501 A G 2 B C 65 B C 75 B
2 1.14 1.14 44.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 2 B C 3 B C 4 B A 5 B G 6 B G 7 B C 13 B A 14 B
G 15 B U 59 B U 60 B C 61 B C 62 B G 63 B C 64 B
C 65 B
3 1.46 1.88 52.2 -0.55 -0.25 15.3 75 5 2 0 4 2 0 0  G 2 B G 52 B G 53 B U 54 B U 55 B C 56 B C 61 B C
62 B G 63 B C 64 B
4 1.36 1.36 70.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 2 B C 3 B C 4 B G 7 B U 8 B C 11 B U 20 B A 21
B G 46 B U 47 B C 48 B G 49 B G 50 B C 51 B G 57
B A 58 B U 59 B U 60 B C 62 B G 63 B C 64 B C 65 B
5 1.32 1.32 74.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 6 B G 7 B U 8 B C 11 B C 13 B A 14 B G 15 B U
20 B A 21 B G 46 B U 47 B C 48 B G 49 B G 50 B C
51 B G 57 B A 58 B U 59 B U 60 B C 67 B
6 1.29 1.29 78.4 -0.41 -0.26 13.8 70 4 2 0 4 2 1 0  A 5 B G 6 B G 7 B C 13 B A 14 B G 15 B U 16 B G
18 B U 54 B U 55 B C 56 B C 61 B
7 1.36 1.36 102.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 8 B C 11 B U 20 B A 21 B G 22 B A 23 B G 24 B C
25 B A 26 B C 27 B U 28 B G 29 B G 30 B A 31 B C
32 B U 33 B A 35 B A 36 B A 37 B A 38 B U 39 B C
40 B C 41 B A 42 B G 43 B G 44 B U 45 B G 46 B U
47 B C 48 B G 49 B U 59 B
8 1.49 1.49 116.8 -0.40 -0.46 10.3 74 4 2 1 4 2 1 0  A 5 B G 7 B U 8 B C 11 B U 16 B G 18 B U 20 B A
21 B G 46 B U 47 B C 48 B G 49 B G 50 B C 51 B U
54 B U 55 B C 56 B G 57 B A 58 B U 59 B U 60 B C
61 B C 62 B
9 2.19 2.19 116.2 -1.29 -0.68 16.4 78 0 0 0 0 0 0 0  C 4 B A 5 B G 6 B G 7 B C 13 B A 14 B G 15 B U 16
B C 61 B G 69 B G 70 B C 71 B C 72 B A 73 B C 74 B
10 2.52 2.52 131.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 2 B C 3 B C 4 B G 7 B U 20 B A 21 B G 22 B A 23
B G 24 B C 25 B A 26 B C 27 B U 28 B G 29 B G 30
B C 32 B U 33 B A 35 B A 36 B A 37 B A 38 B U 39
B C 40 B C 41 B A 42 B G 43 B G 44 B U 45 B U 47
B G 49 B G 50 B C 51 B G 57 B A 58 B U 59 B U 60
B C 62 B G 63 B C 64 B C 65 B
11 1.41 1.41 134.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 6 B G 7 B C 13 B A 14 B G 15 B U 20 B A 21 B G
22 B A 23 B G 24 B C 25 B A 26 B C 27 B U 28 B G
29 B G 30 B A 31 B C 32 B U 33 B A 35 B A 36 B A
37 B A 38 B U 39 B C 40 B C 41 B A 42 B G 43 B G
44 B U 45 B U 47 B G 49 B G 50 B C 51 B G 57 B A
58 B U 59 B U 60 B
12 1.46 1.87 160.2 -1.07 -0.40 19.1 72 11 6 0 4 3 2 0  C 4 B A 5 B G 6 B U 16 B U 17 B G 18 B U 54 B U
55 B C 56 B C 61 B G 70 B C 71 B C 72 B A 73 B C
74 B
13 1.33 1.33 160.7 -0.95 -0.72 11.4 78 0 0 0 0 0 0 0  C 4 B A 5 B G 6 B G 7 B U 8 B C 11 B G 15 B U 20
B A 21 B G 46 B U 47 B C 48 B G 49 B G 50 B C 51
B G 57 B A 58 B U 59 B U 60 B C 61 B C 62 B C 67
B G 70 B C 71 B C 72 B A 73 B C 74 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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