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PDBsum entry 4wc2
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Pore analysis for: 4wc2 calculated with MOLE 2.0 PDB id
4wc2
Pores calculated on whole structure Pores calculated excluding ligands
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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.67 2.87 63.5 -1.01 -0.73 11.1 75 2 2 1 0 2 1 0  G 1 B G 2 B C 3 B C 4 B A 5 B G 7 B U 16 B U 17 B
G 18 B C 61 B C 62 B C 65 B C 66 B C 67 B U 68 B
G 69 B G 70 B C 72 B A 73 B C 74 B
2 1.31 1.31 73.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 8 B C 11 B U 20 B A 21 B G 22 B A 23 B G 24 B C
25 B A 26 B A 37 B A 38 B U 39 B C 40 B A 42 B G
43 B G 44 B U 45 B G 46 B U 47 B C 48 B G 49 B C
67 B
3 2.69 2.87 76.0 -2.22 -0.74 27.6 74 7 4 0 0 1 1 0  C 4 B A 5 B U 16 B U 17 B G 18 B G 70 B C 71 B C
72 B A 73 B C 74 B
4 1.47 1.47 77.6 -0.45 -0.76 4.6 71 0 0 0 0 0 0 0  G 1 B G 2 B C 3 B C 4 B G 7 B U 8 B C 11 B U 20 B
A 21 B G 46 B U 47 B C 48 B G 49 B G 50 B C 51 B
G 52 B G 57 B A 58 B U 59 B U 60 B C 61 B C 62 B
C 65 B C 66 B C 67 B U 68 B G 69 B G 70 B C 72 B
A 73 B C 74 B
5 2.78 2.91 78.5 -1.35 -0.81 16.4 85 5 3 1 0 0 0 0  G 1 B G 2 B C 3 B C 4 B A 5 B G 7 B C 61 B C 62 B
C 65 B C 66 B C 67 B U 68 B G 69 B G 70 B C 71 B
C 72 B A 73 B C 74 B
6 1.34 3.59 89.7 -1.33 -0.28 24.9 73 8 5 1 6 3 0 0  U 54 B U 55 B C 56 B
7 1.34 1.34 93.2 -0.74 -0.79 7.4 77 1 2 1 0 1 1 0  A 5 B G 7 B U 8 B C 11 B U 16 B U 17 B G 18 B U
20 B A 21 B G 46 B U 47 B C 48 B G 49 B G 50 B C
51 B G 52 B G 57 B A 58 B U 59 B U 60 B C 61 B C
62 B
8 1.30 3.62 99.5 -2.00 -0.52 28.4 72 8 6 1 2 3 1 0  U 17 B G 18 B G 53 B U 54 B C 61 B C 62 B
9 2.31 2.31 104.5 -0.44 -0.77 4.4 71 1 0 0 0 1 0 0  G 1 B G 2 B C 3 B C 4 B G 7 B U 20 B A 21 B G 22
B A 23 B G 24 B C 25 B A 26 B A 37 B A 38 B U 39
B C 40 B A 42 B G 43 B G 44 B U 45 B U 47 B G 49
B G 50 B C 51 B G 52 B G 57 B A 58 B U 59 B U 60
B C 61 B C 62 B C 65 B C 66 B C 67 B U 68 B G 69
B G 70 B C 72 B A 73 B C 74 B
10 1.46 1.46 106.7 -1.03 -0.81 12.1 84 0 0 0 0 0 0 0  C 4 B A 5 B G 7 B U 8 B C 11 B U 20 B A 21 B G 46
B U 47 B C 48 B G 49 B G 50 B C 51 B G 52 B G 57
B A 58 B U 59 B U 60 B C 61 B C 62 B C 67 B G 70
B C 71 B C 72 B A 73 B C 74 B
11 1.83 1.83 128.8 -0.70 -0.79 6.9 77 1 2 1 0 1 1 0  A 5 B G 7 B U 16 B U 17 B G 18 B U 20 B A 21 B G
22 B A 23 B G 24 B C 25 B A 26 B A 37 B A 38 B U
39 B C 40 B A 42 B G 43 B G 44 B U 45 B U 47 B G
49 B G 50 B C 51 B G 52 B G 57 B A 58 B U 59 B U
60 B C 61 B C 62 B
12 1.33 3.56 130.9 -1.49 -0.59 22.2 74 7 6 1 2 3 0 0  G 1 B G 2 B C 3 B C 4 B G 52 B G 53 B U 54 B G 63
B C 64 B C 65 B C 67 B U 68 B G 69 B G 70 B C 72
B A 73 B C 74 B
13 2.38 2.38 133.6 -0.96 -0.81 11.2 84 4 3 1 0 0 0 0  C 4 B A 5 B G 7 B U 20 B A 21 B G 22 B A 23 B G
24 B C 25 B A 26 B A 37 B A 38 B U 39 B C 40 B A
42 B G 43 B G 44 B U 45 B U 47 B G 49 B G 50 B C
51 B G 52 B G 57 B A 58 B U 59 B U 60 B C 61 B C
62 B G 70 B C 71 B C 72 B A 73 B C 74 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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