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PDBsum entry 4wbo

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4wbo calculated with MOLE 2.0 PDB id
4wbo
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.19 3.23 28.0 -1.33 -0.39 20.4 85 2 1 3 5 1 0 0  
2 1.59 3.64 34.0 -1.97 -0.36 32.3 83 6 5 2 3 1 1 0  
3 1.76 2.66 38.6 0.38 0.11 13.9 81 4 4 1 6 1 0 0  ANW 601 D
4 2.32 2.49 41.2 0.38 -0.10 13.0 81 2 5 0 6 0 0 0  ANW 601 A
5 2.30 2.48 44.1 -0.20 -0.16 15.9 82 5 4 0 7 0 1 0  ANW 601 A
6 3.19 4.82 45.5 -2.85 -0.70 34.1 79 7 9 2 2 0 1 0  
7 1.59 1.60 57.0 -1.15 -0.29 23.5 88 4 7 3 6 1 0 0  
8 1.57 3.68 65.6 -2.07 -0.46 30.4 82 10 9 4 6 1 1 0  
9 3.86 4.78 67.5 -1.24 -0.49 20.2 83 5 10 1 9 1 1 0  
10 3.22 4.41 78.9 -1.25 -0.51 20.0 84 3 8 3 7 2 1 0  
11 1.59 1.60 83.3 -1.77 -0.38 26.1 83 5 8 6 4 4 0 0  
12 1.61 1.60 85.6 -0.94 -0.39 16.2 78 5 6 3 4 4 0 0  ANW 601 C
13 1.37 4.41 98.0 -2.18 -0.54 28.3 84 7 10 5 5 1 1 0  
14 2.11 2.93 98.3 -1.70 -0.53 22.8 82 6 11 5 7 4 1 0  
15 1.68 1.67 104.9 -0.98 -0.34 16.0 77 7 4 3 4 4 0 0  ANW 601 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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