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PDBsum entry 4v3o

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4v3o calculated with MOLE 2.0 PDB id
4v3o
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 2.45 31.6 -2.87 -0.91 21.2 79 2 6 6 0 1 0 0  
2 1.41 2.47 33.8 -3.02 -0.90 25.6 80 3 7 7 0 1 0 0  
3 1.42 2.46 34.5 -3.13 -0.87 25.4 81 4 5 9 0 1 0 0  
4 1.76 1.76 72.1 -1.74 -0.49 13.4 84 4 4 14 1 5 0 0  CA 1294 B
5 1.83 1.83 72.7 -2.37 -0.58 19.2 84 8 7 15 1 3 0 0  CA 1295 B
6 1.77 1.77 77.9 -2.24 -0.47 20.2 78 12 8 10 2 6 0 0  
7 1.80 1.84 82.3 -2.30 -0.59 18.9 85 8 8 16 1 3 0 0  CA 1294 B
8 2.53 5.84 88.1 -2.66 -0.54 23.9 80 16 12 12 2 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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