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PDBsum entry 4v1c

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Pore analysis for: 4v1c calculated with MOLE 2.0 PDB id
4v1c
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.75 3.38 29.5 -0.77 -0.28 11.3 81 4 2 2 4 1 3 0  
2 1.32 2.35 40.9 -2.69 -0.62 33.9 71 7 3 0 0 2 0 0  
3 1.34 2.29 47.0 -1.37 -0.38 19.5 73 7 3 1 2 2 2 0  
4 3.45 4.25 49.0 -1.82 -0.55 18.0 86 9 2 6 4 0 5 0  
5 3.61 3.71 49.7 -1.25 -0.55 12.4 90 6 2 6 4 0 3 0  
6 1.42 1.77 50.1 -1.56 -0.31 19.3 79 8 2 3 4 2 4 1  
7 1.52 1.69 52.2 -2.89 -0.47 37.0 77 12 6 2 4 1 1 0  
8 3.92 3.94 58.4 -1.63 -0.48 17.2 87 9 1 7 6 0 4 0  
9 1.99 2.17 63.5 -1.35 -0.34 15.9 83 9 2 5 6 1 4 0  
10 1.52 1.69 65.8 -2.79 -0.34 36.8 75 13 6 0 5 1 2 0  
11 3.44 4.24 72.7 -2.04 -0.63 17.6 88 9 4 10 4 0 6 0  
12 1.98 2.17 76.1 -1.18 -0.44 11.8 85 8 2 8 7 1 7 0  
13 2.31 4.10 80.6 -1.61 -0.30 21.9 84 14 1 4 7 0 2 0  
14 1.87 2.03 80.3 -1.16 -0.28 17.8 86 8 0 3 6 0 2 0  
15 1.87 2.03 81.9 -1.75 -0.45 20.0 87 13 1 6 7 0 2 0  
16 2.20 2.26 85.0 -1.10 -0.36 18.7 82 7 6 5 11 1 3 0  
17 3.05 3.19 93.2 -1.41 -0.38 17.7 86 13 1 7 8 0 5 0  
18 1.87 2.03 100.6 -1.19 -0.33 16.0 83 12 1 6 10 1 5 0  
19 2.20 2.26 104.1 -1.37 -0.40 18.9 82 13 6 6 11 1 4 0  
20 1.24 2.53 106.8 -1.10 -0.20 18.1 82 14 1 5 11 1 6 0  
21 1.98 2.17 123.1 -0.96 -0.32 15.2 80 11 6 6 14 2 7 0  
22 2.20 2.26 122.9 -1.06 -0.19 17.4 76 7 7 2 10 4 3 0  
23 1.22 1.55 147.0 -0.91 -0.21 16.1 80 14 6 10 18 2 7 0  
24 1.22 1.53 159.0 -0.51 -0.07 17.8 75 14 8 3 23 3 5 0  
25 1.15 2.51 30.4 3.03 0.90 1.1 70 0 1 0 11 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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