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PDBsum entry 4umo
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Tunnel analysis for: 4umo calculated with  MOLE 2.0
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PDB id
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4umo
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.21 |
1.64 |
22.5 |
1.83 |
0.83 |
2.1 |
73 |
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0 |
1 |
0 |
8 |
4 |
0 |
0 |
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2 |
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1.21 |
1.64 |
25.6 |
1.83 |
0.80 |
4.5 |
75 |
0 |
1 |
0 |
9 |
4 |
0 |
0 |
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3 |
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1.20 |
1.20 |
32.9 |
0.92 |
0.42 |
7.8 |
74 |
1 |
3 |
2 |
7 |
5 |
0 |
0 |
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4 |
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1.23 |
1.68 |
24.4 |
2.43 |
1.06 |
1.3 |
76 |
0 |
1 |
0 |
10 |
4 |
0 |
0 |
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5 |
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1.30 |
1.62 |
25.7 |
2.21 |
0.98 |
1.4 |
76 |
0 |
1 |
0 |
10 |
4 |
0 |
0 |
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6 |
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1.18 |
1.18 |
30.2 |
1.35 |
0.66 |
6.3 |
72 |
1 |
2 |
0 |
8 |
5 |
0 |
0 |
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7 |
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1.21 |
1.21 |
31.6 |
1.18 |
0.57 |
6.1 |
72 |
1 |
2 |
0 |
8 |
5 |
0 |
0 |
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8 |
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1.48 |
1.67 |
15.9 |
-0.08 |
-0.16 |
13.3 |
87 |
1 |
1 |
0 |
3 |
1 |
0 |
0 |
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9 |
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1.47 |
1.47 |
16.4 |
0.04 |
-0.13 |
11.5 |
87 |
1 |
1 |
0 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program