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PDBsum entry 4umm
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Pore analysis for: 4umm calculated with  MOLE 2.0
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PDB id
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4umm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.66 |
1.67 |
28.6 |
-0.45 |
-0.60 |
2.7 |
84 |
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0 |
1 |
3 |
2 |
0 |
2 |
0 |
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2 |
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1.68 |
1.68 |
31.2 |
-1.81 |
-0.59 |
16.6 |
83 |
4 |
1 |
2 |
1 |
1 |
0 |
0 |
DA 11 C DT 12 C DC 14 C DG 13 D DA 14 D DA 15 D
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3 |
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2.59 |
2.77 |
34.6 |
-1.80 |
-0.39 |
23.3 |
74 |
5 |
1 |
0 |
1 |
0 |
1 |
0 |
DC 1 C DA 2 C DA 11 C DA 15 D DC 16 D DC 17 D DT
20 D
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4 |
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1.63 |
2.60 |
40.9 |
-1.28 |
-0.19 |
24.7 |
77 |
5 |
5 |
1 |
4 |
3 |
1 |
1 |
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5 |
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1.20 |
1.20 |
52.1 |
-1.65 |
-0.45 |
18.3 |
82 |
4 |
0 |
2 |
2 |
1 |
0 |
1 |
DA 11 C DT 12 C DG 19 C DT 20 C DA 5 D DG 6 D DT
7 D DG 8 D DC 9 D DA 15 D
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6 |
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2.30 |
3.88 |
52.6 |
-0.95 |
-0.45 |
11.6 |
78 |
1 |
3 |
4 |
5 |
2 |
3 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program