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PDBsum entry 4um9
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Tunnel analysis for: 4um9 calculated with  MOLE 2.0
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PDB id
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4um9
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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13 tunnels,
coloured by tunnel radius |
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17 tunnels,
coloured by
tunnel radius
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17 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.40 |
1.41 |
31.6 |
-0.48 |
-0.45 |
11.1 |
81 |
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2 |
2 |
1 |
6 |
0 |
1 |
0 |
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2 |
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1.98 |
2.08 |
39.5 |
-0.94 |
-0.31 |
15.0 |
85 |
4 |
2 |
6 |
5 |
3 |
2 |
0 |
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3 |
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1.87 |
2.03 |
34.9 |
-0.78 |
-0.32 |
11.9 |
83 |
5 |
2 |
5 |
6 |
3 |
2 |
0 |
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4 |
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1.25 |
1.46 |
17.8 |
-0.80 |
-0.02 |
16.3 |
75 |
2 |
2 |
1 |
1 |
4 |
1 |
0 |
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5 |
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1.26 |
1.45 |
23.6 |
-0.57 |
-0.33 |
7.6 |
83 |
0 |
2 |
4 |
1 |
2 |
1 |
0 |
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6 |
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1.21 |
1.22 |
17.2 |
-0.20 |
-0.06 |
4.9 |
84 |
1 |
0 |
3 |
1 |
2 |
0 |
0 |
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7 |
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1.15 |
1.31 |
19.6 |
-0.99 |
0.02 |
14.4 |
77 |
2 |
2 |
0 |
1 |
2 |
1 |
0 |
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8 |
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1.18 |
1.24 |
24.1 |
-1.13 |
-0.35 |
7.8 |
81 |
2 |
1 |
4 |
1 |
2 |
0 |
0 |
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9 |
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1.49 |
1.54 |
15.3 |
-0.62 |
-0.18 |
21.5 |
83 |
3 |
1 |
0 |
3 |
0 |
0 |
0 |
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10 |
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1.49 |
1.54 |
15.5 |
-0.24 |
-0.07 |
17.7 |
88 |
2 |
1 |
0 |
2 |
0 |
0 |
0 |
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11 |
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1.48 |
1.54 |
17.9 |
-1.00 |
-0.23 |
24.9 |
86 |
2 |
1 |
0 |
3 |
0 |
0 |
0 |
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12 |
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1.31 |
1.37 |
16.3 |
0.12 |
-0.29 |
4.6 |
73 |
1 |
1 |
1 |
2 |
3 |
0 |
0 |
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13 |
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1.31 |
1.31 |
21.6 |
-0.18 |
-0.32 |
8.9 |
81 |
1 |
1 |
2 |
2 |
3 |
0 |
0 |
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14 |
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1.31 |
1.31 |
23.6 |
-0.29 |
-0.38 |
8.9 |
78 |
1 |
1 |
2 |
2 |
4 |
0 |
0 |
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15 |
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1.52 |
1.65 |
19.0 |
-0.22 |
-0.04 |
16.2 |
55 |
2 |
1 |
0 |
0 |
3 |
0 |
2 |
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16 |
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1.35 |
1.35 |
16.4 |
0.12 |
-0.23 |
6.5 |
61 |
1 |
1 |
0 |
2 |
0 |
2 |
1 |
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17 |
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1.16 |
1.46 |
15.4 |
-0.05 |
0.35 |
21.0 |
81 |
3 |
1 |
0 |
1 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program