PDBsum entry 4um8 Go to PDB code:  Pore analysis for: 4um8 calculated with MOLE 2.0 PDB id 4um8 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.58 3.50 50.0 -1.21 -0.39 18.3 81 6 2 2 3 2 2 0   2 2.14 4.78 50.8 -2.51 -0.65 29.3 89 5 5 7 2 1 0 0  NAG 2 Q BMA 3 Q MAN 4 Q 3 1.24 1.42 77.7 -0.67 -0.04 15.3 81 6 4 3 5 3 4 0   4 1.33 1.32 51.6 -1.39 -0.43 15.7 80 3 4 5 1 5 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.