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PDBsum entry 4u8h
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Tunnel analysis for: 4u8h calculated with  MOLE 2.0
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PDB id
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4u8h
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
1.37 |
18.6 |
0.51 |
-0.14 |
4.9 |
72 |
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2 |
0 |
1 |
2 |
1 |
0 |
2 |
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2 |
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1.24 |
1.35 |
22.2 |
0.29 |
-0.08 |
6.8 |
72 |
2 |
0 |
2 |
2 |
1 |
0 |
3 |
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3 |
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1.25 |
1.39 |
22.6 |
-0.09 |
-0.16 |
10.9 |
72 |
2 |
1 |
1 |
2 |
1 |
0 |
2 |
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4 |
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1.24 |
1.37 |
25.0 |
-0.66 |
-0.09 |
10.0 |
71 |
2 |
2 |
3 |
2 |
3 |
0 |
2 |
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5 |
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1.47 |
1.65 |
20.5 |
-3.12 |
-0.36 |
37.6 |
72 |
6 |
3 |
0 |
0 |
3 |
0 |
0 |
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6 |
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1.46 |
1.66 |
22.6 |
-2.82 |
-0.39 |
34.3 |
73 |
6 |
3 |
1 |
0 |
4 |
0 |
0 |
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7 |
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1.26 |
2.43 |
23.6 |
-1.57 |
-0.23 |
26.2 |
84 |
3 |
2 |
2 |
5 |
0 |
1 |
0 |
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8 |
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1.44 |
1.77 |
24.0 |
-0.84 |
-0.26 |
17.3 |
81 |
4 |
2 |
3 |
5 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program