PDBsum entry 4u5c Go to PDB code:  Tunnel analysis for: 4u5c calculated with MOLE 2.0 PDB id 4u5c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.65 16.2 -0.94 -0.39 12.6 85 2 0 1 3 1 0 0   2 1.18 2.10 19.7 -0.03 0.15 8.0 82 2 0 1 3 2 0 0   3 1.30 1.93 20.5 1.41 0.70 6.5 78 1 1 1 3 3 0 0   4 1.21 2.07 16.8 0.42 -0.09 5.6 88 2 0 1 3 1 0 0   5 1.15 1.15 35.0 1.01 0.18 7.0 81 1 2 3 8 3 1 0   6 1.27 1.59 16.0 -0.87 -0.40 11.3 85 1 2 1 2 1 1 0   7 1.23 3.45 19.4 2.49 0.94 0.9 85 0 0 1 10 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.