PDBsum entry 4u2m Go to PDB code:  Tunnel analysis for: 4u2m calculated with MOLE 2.0 PDB id 4u2m Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.60 2.75 27.7 -2.09 -0.71 12.2 82 1 4 5 3 0 0 0   2 1.29 1.54 31.7 -1.09 -0.39 10.4 88 1 3 4 5 1 0 0   3 2.63 2.81 35.4 -1.85 -0.77 12.2 89 1 4 9 2 0 0 2   4 2.62 2.80 43.7 -2.74 -0.78 23.6 82 4 3 11 2 0 0 2   5 2.58 2.73 47.8 -1.74 -0.56 18.0 87 3 5 7 4 0 0 2   6 1.50 1.65 48.9 -1.43 -0.61 21.3 83 3 8 6 4 1 0 2   7 2.59 2.75 49.1 -2.30 -0.50 20.6 82 4 3 5 2 0 1 2   8 2.60 2.77 49.2 -0.79 -0.21 12.3 78 3 2 8 3 2 0 3   9 1.52 1.65 15.9 0.48 0.03 15.9 81 2 2 0 6 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.